Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | IQFTQRSLEQLWLFGFAGLYALHSLSGIIFFVKCKGLKLDLEEIDGVPKQKEENERFSKIIETIKGLNSAESEYDFNWPAGLPKPEDGKPKDTEQAAVFDLVLMATAYVFLHELKHVIFESEGNSPEDRLREELECDSFALEMMLSKIQDYSAKSGYPEGQVLMKRSISIALGSVFLAVATPRHNLGGTTTHPAVHDRWSATLGKIELEENDFYWLYFA |
1 | 4aw6A | 0.13 | 0.10 | 3.32 | 1.04 | FFAS-3D | | -IGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFT--------PLPEGKLKEEIEVMAKS----------------IDFPLTKVYVVEGSDTLLEQGCKNEEVLAVLGHELGHWKLGHTVCLTVLSRRFEFQADAFAKKLLYSALIKLNKDNLGFPVSDWLFSMW--------------------HYSHPPLLERLQALKT--------------- |
2 | 6aitA1 | 0.12 | 0.10 | 3.39 | 1.42 | HHsearch-2 | | ------SIGQEMQMGDYYV-------RQL---RGSAPLI------NDPLLTQYINSL------GMRLVSHANSVKTPFHFNNDEINAFAFFGGNVALFRYSNESQLASVMAHEISHVTQRHLARAISFTQQNEQEADRIGIQVLQRSG--------FDPQAM--------PTFLEKLLDQASSRPPEILLTHPLPESRLADARNRANQMRPMVDFYLAK |
3 | 6aitA1 | 0.11 | 0.09 | 3.26 | 1.66 | HHsearch | | ------SIGQ-------EMQMGDYYVRQL---RGSAPLIN------DPLLTQYINSL------GMRLVSHANSVKTPFHFNNDEINAFAFFGGNVALFRYSNESQLASVMAHEISHVTQRHLARAISFTQQNEQEADRIGIQVLQRSG--------FDPQA--------MPTFLEKLLDQASSRPPEILLTHPLPESRLADARNRANQMRPSEDFYLA- |
4 | 5cwpA | 0.09 | 0.07 | 2.79 | 0.77 | SPARKS-K | | KRLAQEAAEEVKRALKLIVEAIEAAVRALEAAERTGDP-------------EVRELARELVRLAVEAAEEVQRN---------------PSSSDVNEALKLIVEAIEAAVRALEAAERTGD---------PEVRELARELVRLAVEAAEEVQRNPSS--EEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE- |
5 | 6aitA1 | 0.12 | 0.08 | 2.92 | 1.04 | FFAS-3D | | ----------------------MQMGDYYVR--------QLRGSAPLINDPLLTQYINSL---GMRLVSHANSVKTPFHFFFFG----GNVVLHSALFRYSDESQLASVMAHEISHVTQRHPQGMISFTQQNEQEADRIGIQVLQRS----------------GFDPQAMPTFLEKLLDQARYSSRPPELTHPLPESRLADARNRAN------------ |
6 | 6aitA1 | 0.16 | 0.12 | 3.95 | 0.70 | HHpred | | -----------------------YYVRQLR----GSAPL-----INDPL---LTQY---INSLGMRLVSHANSVKTPFHFFLNNDEINAFAFFGGNALFRYSESQLASVMAHEISHVTQRHLARMISFTQQNEQEADRIGIQVL--------QRSGFDPQAMPTEKLLDQAR-------YSS-RPPEILLTHPLPESRLADARNRANQRPSEDFYL--- |
7 | 5cwpA | 0.12 | 0.11 | 4.06 | 0.80 | MUSTER | | RELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRE-ELVRLAVEAAEEVQRSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKRE--KARERVREAVERAEVQRDPSGWLE-- |
8 | 3rauA | 0.08 | 0.06 | 2.50 | 0.72 | CNFpred | | AHEDIKYEQACILYNLGALHSMLGAMD---------------KRVSEEGMKVSCTHFQCAAGAFAYLREHFPQ---AYSVDMS-----------RQILTLNVNLMLGQAQECLLEKSMLDN--RKSFLVARISAQVVDYYKEACRALNPDTASLLGIQKDWKKLVQMKIYYFAAVAHLHMGKQA------KFGERVAYFQSALDKLN------------ |
9 | 3c37A | 0.15 | 0.11 | 3.84 | 1.42 | HHsearch-2 | | FNISIEQEKELGN----------KFAVEI-E-KQQQ-PVN------DPEVQRYVDKV------GKRLLSGARAVEFDYVFKDDSVNAFAIPGGRTGLLKAANETELAGVLAHEINHAVARHGTRQGSYSREYENQADFLGVET-YKA--------GYNPNG--------LTS---FFQKLN--------ATHPLTSERIQRVQAEIAKLPPQRYLEFKK |
10 | 5cwpA | 0.10 | 0.10 | 3.68 | 0.90 | Neff-PPAS | | RELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAPEKREKARERVREAVERAEEVQRDPSGWLE-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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