Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | DESTDEDDNLPPPSSRSKNIGTKAKEVVSANVVGLKPPKLGTWETDSKPFTIIDGLSTKSLYPLMQEHQHLLEQQQRAQSQSPEYHSSHEATTVNGDELTLNELLNMSELEDD |
1 | 5jcss | 0.08 | 0.07 | 2.85 | 0.81 | SPARKS-K | | IDELHSRSTAFDRLTLGFELGENID--FVSIDDGIKKIKLNEPDMSIPL-----KHYVPSYLSRPCIFAQVHDILLLSDEEPIEESLAAVIPISHLGEVKWANNVLNCTEYSE |
2 | 2a7yA | 0.12 | 0.07 | 2.52 | 0.38 | FFAS-3D | | -------------KGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPG--SDAVVVTATEHAEAEKRAAARAGHAAT----------------------------- |
3 | 1clcA1 | 0.09 | 0.06 | 2.35 | 0.30 | HHpred | | -----KVSAAKIT------ENYQFDSRIRLNSIGFIPSKKATIAANCSTFYVVKE-DGTIVYTGTATS-MF-D-ND---T-KETVYIADFSSVNEE----------------- |
4 | 5njlA3 | 0.14 | 0.13 | 4.52 | 0.77 | MUSTER | | --ATEKYENSADLSAEANSITEKAK---TETNGIYKVADVKASYDSAKDKLVIT-LRDKTDTVTSKTIEIGIGDEKIDLTANP-VDSTGTNLDPSTEGFRVNKIVKLGVAGAK |
5 | 5a9uA | 0.15 | 0.07 | 2.40 | 0.59 | CNFpred | | -------------------------------------RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS---------------------SLAMLDLLHVARDIAC |
6 | 6gos11 | 0.21 | 0.12 | 3.65 | 0.68 | HHsearch-2 | | --------------------------------------------MNILPFEIISRNTKTLLITYISSVDITHEG--MKK----VLESL-RSKQGIISEYLLDKLLDESLIDKD |
7 | 6eunA | 0.12 | 0.12 | 4.34 | 0.80 | Neff-PPAS | | VKKAATVAIAAAYNNGQEINGFKAGETIYDIDEDGTITKKDATAADVEADD-FKGLGLKKVVTNLTKTVNENKQNVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTN |
8 | 1clcA1 | 0.08 | 0.07 | 2.75 | 0.45 | HHsearch | | --IETKVSAAKIT------ENYQFDSRIRLNSIGFIPSKKATIAANCSTFYVVKE-DGTIVYTGTATS-MF-D-ND---T-KETVYIADFSSVNEEGTYYVPGV-GKSVFAM- |
9 | 2mcdA | 0.05 | 0.04 | 2.04 | 0.68 | SP3 | | RGSHHHHHHGSVSFGAPSPLSSESEDEINYMTPPEQEAQPGALAALHAE-----GPLAGLPVTRSDARVLIFNEWEERKKSEPWLRLDMSDKAIFRPHLR------------- |
10 | 2mcdA | 0.05 | 0.04 | 2.06 | 0.47 | PROSPECTOR2 | | MRGSHHHHHHGSVSFGAPSPLSSESEDEINYMTPPEQEA-----QPGALAALHAEGPLAGLPVTRSDARVLIFNEWEERKKSEPWLRLDMS----------DKAIFRRYPHLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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