Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | YGSSYNEFSVNPTLDHYRGKLAASKASFNDVWDTVKSEVEPAISQNEAQQTLLKNALSVVEKMPTTAAGGNPFGGAPAGQSAAALGQVDESAFKNMWNFNLADAAFGWLVLEIQDGRIGTEMRAQGFNFSHR |
1 | 5cwcA1 | 0.14 | 0.10 | 3.36 | 0.71 | SPARKS-K | | EKEELRERLVKICVENAKRKTEEAREAAREAFELVREAAERAIDSSEVLELAIRLIKECVENAQREGYD------------ISEACRAAAEAFKRVAEAAKRAGI--------------------------- |
2 | 5j1sB | 0.15 | 0.13 | 4.33 | 0.63 | FFAS-3D | | YSSPAQQVPKNPALEAFLAQFSQLEDKFSFLWQRGRKFLQKHLNAAREGRETLKCLSHHVADAYTSSQKVSGRTWQDSDTVKLLVDLELSYGFENIFY-KYCDFKDVALVLTVL------------------ |
3 | 5uj8A1 | 0.16 | 0.11 | 3.78 | 0.34 | HHpred | | ----------------------LRFETYQLIWQQMKSENERLQE--ELNKNLFDNLIEFLQKSHSG-LREIPTAAVALQKLISQLVDSYMTVSKRTTS---SQWQSPPVVVILKD--------MESFATK-- |
4 | 4bujB | 0.12 | 0.11 | 4.05 | 0.74 | MUSTER | | LVEVLMRCS---LDLYSQGFLLKSVSIAKDTIERIKIIISELKCENQQVWIYLSQVLRLFIWIESKVDTLPVESLVSIFENSQFSGSEEIDSVDNIKIDTLLDSTTDDNVSIACKFLILASKYSVSDQKFTD |
5 | 4fyeA | 0.13 | 0.08 | 2.91 | 0.56 | CNFpred | | ---------------LRKAYYTEHKGQINKALQELKEQISPVIQ-DPETKSRLQHFYNSCAYLTQ----------------------AQELYYENTWHHGKNNFKLQTLMASLSDYANTKGSKSN------- |
6 | 2pffB | 0.13 | 0.11 | 3.97 | 0.61 | HHsearch-2 | | SNTPDKDYLLSIPTDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSL-PPSILEDSLENNEGVPSPMLSISNL---------TQEQVQDYVNKTN---SHLPAGKQVNLVLTLRKAKAPSGLDQSRIPFSER |
7 | 1lihA | 0.15 | 0.14 | 4.88 | 0.71 | Neff-PPAS | | LQHCQQGFVISNELRQQQSELTSTWDLMLQTRINLSRSAARMMMQSSAKTDLLQNAKTTLAQAAAHYANFKNMTPLPAMAEASANVDEKYQRYQAALAELIQFLDNGNMDAYFAQARVSENLYRQTFDQSA- |
8 | 5uj8A1 | 0.16 | 0.11 | 3.80 | 0.49 | HHsearch | | ---------------------KLRFETYQLIWQQMKSENERLQE--ELNKNLFDNLIEFLQKSHSG-LREIPTAAVAMQKLISQLVDSYMTVSKRTTS---SQWQSPPVVVILKD--------MESFATKV- |
9 | 2kubA | 0.09 | 0.05 | 2.00 | 0.65 | SP3 | | ---------------------ENLDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGDPNATVADLQIAYTTLGNNELIKL------------------------------------ |
10 | 6f0kH | 0.09 | 0.08 | 2.90 | 0.53 | PROSPECTOR2 | | YPGGVALTRRDETLAPYVAQYEAILEAHQQAVLEFEHWKEQVAAHPARHEALLQQYADVAWAVAQHVNPALLARAYTSSGPRFFFYVVPPQYARQVNEQAVPPLQVVRYL-------------------AAQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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