Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | RDVWELAVWDPLPVSLQLFSLFSPGHVLVYMLFLPLENLDPRPSVTVFNCLALQVILSVQMLFLQSRFSQQIKDTAIIHKEVLHEYDTKFVHPRLHPLVRDVGTQ |
1 | 6hnbA | 0.11 | 0.10 | 3.81 | 0.74 | SPARKS-K | | VEGRVVRLDSFSKVLLRLGWIVGQLLERYVRLHEVSVQNPSGFSEALANALLRKWGHSGYLDWLIGLRAEYTHKRDVAIDALDQFVPKEVS--SFNPPVAGMFFT |
2 | 3cirD | 0.11 | 0.09 | 3.09 | 0.65 | FFAS-3D | | -------FWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSSFIGRVFLFLMIVLPLWCGLHRMHHAMHDGKWVFYGLAAILTV----------------- |
3 | 6co7A3 | 0.13 | 0.10 | 3.61 | 0.23 | HHpred | | ---------ARNTWV-TITSVQYP----YWQMYGELFLDEVDPDGRWLMVFTNILLLNLLIAIFNYTFERVQEDSDKVRYDLVQEYHSR---PVFAPPL------ |
4 | 3hgfA | 0.12 | 0.11 | 4.02 | 0.75 | MUSTER | | PMVKEIE----KKIENIVTKI--DKKKYIYDNMKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSENMIKSMEKYIKDLDEIKEQSPKAEMNT- |
5 | 4u8yA | 0.09 | 0.07 | 2.53 | 0.67 | CNFpred | | --------------RATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDNAIVVVENVERVMLPPKEATRKSMGQIQGALV-------------- |
6 | 2pffB | 0.14 | 0.13 | 4.55 | 0.66 | HHsearch-2 | | NTPDKIPISCPLIGVIQLAHYFTPGELRSY-LKGATAIAETDSWESFFVSVRK--AITVLFFIGVRCYEAYPNTSPSILEDS-LENN-EGVPSPMLSISKNLVVS |
7 | 5cwpA1 | 0.06 | 0.06 | 2.43 | 0.63 | Neff-PPAS | | ERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNP------------ |
8 | 5d5yB | 0.16 | 0.08 | 2.53 | 0.34 | HHsearch | | ----------------------SQ------------------QQIAA--LSESLQATQQQLQALQQQCYELEKTNRLLVSEVMTLQK--MVKAQ----------- |
9 | 3zikA2 | 0.11 | 0.09 | 3.07 | 0.72 | SP3 | | ----------------------VYGAVPALARLISGQLKDWDTACSLLENNIVAAPSGSDIEEYAQAFQTLAGSREKLTNEGVLKCLIKLTHTTVLELSAD---- |
10 | 1w9rA | 0.03 | 0.03 | 1.71 | 0.49 | PROSPECTOR2 | | GSH------MPEKKVAEAEKKVEEAKKKAKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAAKAEVESKKAEATRLEKIKTEEAKRKAAEEDKVKEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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