Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ISAKTIITSLSLFHITLGYFFLTSPITVADQALVWVLGEAMGMPFARAFDSQSPSLAFLAVMLAFVGITDLVTLSLPDEICLVHHWGTQAPLRMSVFLFLVFYTFTFSASSPIYAGANPRGILSHPSAHMHNPGYKPATWGGDGLKNRVFFTFIFLELMCWFWVWVTLREERKEVLTR |
1 | 3ixzA4 | 0.09 | 0.08 | 3.25 | 1.00 | SPARKS-K | | SIVTGVEQGRLIFDNLKKSIAYT---LTKNIPELTPYLIYITVSVPLPL--GCITILFIELCTDIFPSVSLAYEKAESDIPLAAYSYFIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYYTVFFISIEMCQIADVLIRKTRRLSAFQQG |
2 | 2jafA | 0.12 | 0.10 | 3.40 | 0.87 | FFAS-3D | | --GRYLTWALSTPMILLALGLLADLFTVIAADIGMCVTGLA-----AAMTTSALLFRWAFYAISCAFFVVVLSALVTDWAASASSAGTAEIFDTLRVLVVVLWLGY-------------------PIVWAVGVEGLALVQS----VGATSWAYSVLDVFFAFILLRWVANNERTVA-- |
3 | 2pffB | 0.14 | 0.12 | 4.24 | 0.32 | HHpred | | -YFEELRDLYQTYHVLVGDLIKFSAETLSELVFTQNILEWLENPSNTPDKDYSIPIS-C-PLIGVIQLAHYVVTFTPGELRWESFFVSVRKAITVLFFIGV-RCYEAYPNTSLPPSDSLNEPSPMTVQDSHLPAGKQVISLVNGAKNLVVSGYGL---------NLTLRKAKA----- |
4 | 6e9nA2 | 0.15 | 0.14 | 4.74 | 0.77 | MUSTER | | AKDWKLVFHRKLIGVYLGQFAVASTLWFFLTWFPNYLTQEKGITALKA-----PFLAAFVGVLLSGWVADLLVRKGFSLISTCIMGANYTPMMIMCLMALAFFGNGFASITWLVSSLAPMRLIGLTGGVFNFAGGLGGITVAQGYGFAPALVYISAVALIGALSYILLVGDVKR---- |
5 | 3rkoB | 0.09 | 0.06 | 2.33 | 1.03 | CNFpred | | --TPVSALIHAATMVTAGVYLIAR--------THGLFLMT------------PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAA---------------------------------------IFHLMTHAFFKALLFLASGSVILACHHEQNIF |
6 | 2pffB | 0.12 | 0.12 | 4.15 | 0.86 | HHsearch-2 | | DYFEELRDLYQTYHVLVGDLIKFSAETLSELIAEKVFTQGLNILENTPDKDYSIPIS-CPL-IGVIQLAHYVVTFTPGELSWESFFVSVRKAITVLFFIGV-RCYEAYPNTSLPPSDSLNEGSPMTVQDSHLPAGKQVISLVNGAKNLVVSGPPQS----LYGLNLTLRKAKAPSGLD |
7 | 1pw4A2 | 0.07 | 0.07 | 2.97 | 0.85 | Neff-PPAS | | IFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQ |
8 | 5xtco | 0.14 | 0.07 | 2.48 | 0.36 | HHsearch | | ------------------SFPKYKPSSLRTL--------PETLDPA-EY--------------------N----ISPETRRKREYLLQYDPNRWA-YARTNVYPNF-RP----------------------------------TPKNSLMGLCGFGPLIFIYYIIKTERDRKEKLIQ- |
9 | 6e9nA2 | 0.13 | 0.13 | 4.47 | 0.75 | SP3 | | AKDWKLVFHRKLIGVYLGQFAVASTLWFFLTWFPNYLTQEKGITALKAGFMTTPFLAAFVGVLLSGWVADLLVRKGFSLCIMGANYTNDPMMIMCLMALAFFGNGFASITWSLVSSLAPMRLIGLTGGVFNFAGGLGGITVAQGYGFAPALVYISAVALIGALSYILLVGDVKR---- |
10 | 5cwmA | 0.12 | 0.12 | 4.19 | 0.69 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQASEEDLALRTAEEAAREAKKVLEQAEKEGDPEVAAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIAEARELQERVKELRER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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