Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | GLQLVGPFDILAGKHKTKKKSTGPNFNLHWRFYYDPPEFQTIIIGDNKTQYHMGYFRDSPDELPVYVGINEAKKNCIIVPNGDNVFAAVKLFLMKKLKEVMDKKKTNLLKNIDEKLTETARELGYSLEQRTMKMKQRDKKVVTKTFHGAGLVVPVDKNDVGYRELPETDANLKRICKTIVEATNDEERLKAFAPIEEMMTFVQFANDECDYGMGLELGMDLFCYGSHYFHKVAGHLLPLAYKLLKRNLFAEI |
1 | 4uosA | 0.16 | 0.10 | 3.42 | 0.59 | SPARKS-K | | -----------------------------------------------------------------------------------GDNEEVKKMLEKMIEEIKKKKVKEMLEKMIKEIKKMLEN-GEDSEKILKKAKEMAEKMVIELAEKIEMAEKILKKELG-----VDNEEVKKMLEKMIEEMLEKAIKKVKEMLEKMIKEIKKMLENGELKKAKEMAEKILKMVIEKILKKAKEMAEKILKKVKELGVG-- |
2 | 1a87A | 0.11 | 0.10 | 3.71 | 0.81 | FFAS-3D | | ----VGEITITPDNSKP------------GRYISSNPEYSLLIDAESIKGTEVYTFHTRKGQYVKVTVPDSNIDKMRVDYVNKRFVSQFLLFRKEEKEKNEKEALLKASELVSGMGDKLGEYLGVKYKNVAKEVANDIKNFHGRNIRSYNEAMASLNKVLANPKMKVNKSDKDAIVNAWKQVNAKDMANKIGNKVEKIREKSIEGYNTGNWG-PLLLEVESWIIGG-VVAGVAISLFGAVLSFLPISGLA-- |
3 | 4nurA | 0.14 | 0.12 | 4.09 | 0.43 | HHpred | | ---MAGTASYMYGNLLPPDAGAGLGTTSAGTVTLIPPTGETHVI----DGLTYEFMY-APGEAPAEMLYYIKEK--KALNAAEDSTLAWSKYLNEALKLWGVQWGNEQLSLQRDMYRYINDNKGYTMTEIAEQVKLIATKFSNRGYYGS---------------L---NHNVKATYVLYLGELPPADKAEMMGGADAVLKKAKEYYDKGDFRWVAEVVNHVVFAEPN--NQAAKNMQADALEQLGYQAESG- |
4 | 4uosA | 0.15 | 0.11 | 3.59 | 0.64 | MUSTER | | ------------------------------------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEEKMIKEIKKMLENSEKILKKAKEMAEKILKMVIELAEKILKKAKEMA-ILKKVKELGVDNEEV---KKMLEKMIEEIKKM-LEKAIKKVKEMLEKMIKEIKKMLENGELKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGV |
5 | 5u1sA | 0.11 | 0.08 | 2.71 | 0.56 | CNFpred | | -------------------------------------NINVITIDFCTGNLLLSKLEPR--RKRRTHLRLPL-VHLSFPEATKKLLSIINESNQTTSVEVTNKSWWTTRYDLDKRMQQLLNNIENS---------------WFNGVQ--GFFSPEV----------VDNSLFEKFKDKFYEI------------LHQNLPSRKLYGNP-VEDWVIELFLKLNPQ-EIDFLSKMEDLIYFVLDILLENAYDEI |
6 | 4g3aA2 | 0.12 | 0.04 | 1.40 | 0.39 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------PPQALIDKLTSCFKHKNAKVREEFLQTIVNALHEYGT--QQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVGDRLRPDL |
7 | 1a87A | 0.08 | 0.08 | 2.95 | 0.64 | Neff-PPAS | | ----------------TPDNSKPGRYISSNPEYSLLAKLIDAESIK---GTEVYTFHTRKGQYVKVTVPDSNIDKMRVDYVVKRFVSQFLLFRKEEKEKNEKEALLKASELVSGMGDKLGEYLGVKYKNVAKEVANDIKNFHGRNIRSYNEAMASLNKVLANPKMKVNKSDKDAIVNAWKQVNKAFKVADLAIKVEKIREKSIEGYNTGNWGPLLLEVESWIIGGV--VAGVAISLFGAVLSFLPISGLAVT |
8 | 4irtA3 | 0.15 | 0.06 | 2.01 | 0.57 | HHsearch | | ------------------------------------CENQTS-SADAGGNPYIAYWREPNSDVPQYRIVWNDG-KWHQRQITDTPFTL-----K-----------------------------GIPIA--------R-PRIVVEGG---EVFYIFRDEERGSRVS-AHAT-------------DVGTSKWTITDLTDF----------S------------------------------------------- |
9 | 3x17B | 0.15 | 0.13 | 4.27 | 0.64 | SP3 | | AFA--------DGQLHLPESGNGVPDILQ------RPDYHKLAGLRWPGMI-------RPEQQRRYVYRITTQDTA--------KAAAAWAMAARIFAPF-DAAFARKALAAAEQAWRFLAASGPILDYPAEDNSGSGHDYIARMARTGL----PAYAPVSW---VNPAALGYFDYVTLGQKGDPAIRARLVQRILEGARSVFQTYEQSGYGVPILAGS--FHWGSNKEALAKGMLLLFAHHLEPRPEYERA |
10 | 4krxA | 0.11 | 0.11 | 3.83 | 0.89 | PROSPECTOR2 | | ENKLPVLDTVVNTLQPDLPPWPATGTIAEQRWNAGAPEMATYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFIL----GNLDTHDRIMRLLASYSPEARFPQAIEEIVAACCYFHQQAEDYQINMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRLGGVWDGLTQQDLQMYEEAY--LSNDADRESPYYCLDDSRLLYQTLAAH---QQPCEFAFLHYSRMMKT----ADEALRDGAQFFTA----QL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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