Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | DGDMVLFVAEDLENKIKLSSPVTKKGETPSFPGSRSSTPCLYRQALTPQVPLLDHNVLNELEMEARKVATSVDALTENLAAILHSASALTVGCLETYRDAVCKTCDAVDHNIKSMYQLMAKCEELSKSMGPVYKLADQIKEVKRMLELFES |
1 | 5ic0A2 | 0.07 | 0.06 | 2.49 | 0.88 | SPARKS-K | | ECETAIAALNSCLRDLDQASLAAVSQQLAPREGISQ------------------EALHTQMLTAVQEISHLIEPLASAARAEASQLGHKVSQMAQYFEPLTLAAVGAASKLLDQTKTLAESALQLLYTAKEAEALEEAVQMMTEAVEDLTT |
2 | 3euhB2 | 0.07 | 0.06 | 2.48 | 0.97 | FFAS-3D | | ---QLSIVAGELKRAADAAEEGGDEFH--------------WHRNVYAPLKYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSLSETSGTLRELQDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRI-- |
3 | 5zuvA | 0.20 | 0.11 | 3.60 | 0.38 | HHpred | | ------------------------------------------------------------LQENQKILAASFNKAMTNIVDAFTGVNDQTSQALQTVATALNKIQDVVNQQGNSLNHLTS---QLRQNFQA---ISSSIQAIYDRLDTIQS |
4 | 5cwjA | 0.15 | 0.14 | 4.70 | 0.84 | MUSTER | | --D-----SEEEQERIRRILKEARKSGTE--ESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESEEALRQAIRAVAEIAKEASEVLEEAIRVILRIAKESEEALRQAIRAVAEIAKEPRVLEEAIRVIRQIAEESEEARRQAERAEE |
5 | 2nrjA | 0.12 | 0.09 | 3.25 | 0.63 | CNFpred | | ----------DLPGRIVQDQKNARA----------------------------AVTWDTKVKKQLLDTLNGIVEYDTTFDNYYETMVEAINTGGETLKEGITDLRGEIQQNQKYAQQLIEELTKLRDSIGDVRAFGSNKELLQSILKNQGA |
6 | 5zuvA | 0.20 | 0.11 | 3.60 | 0.43 | HHsearch-2 | | ------------------------------------------------------------LQENQKILAASFNKAMTNIVDAFTGVNDATSQALQTVATALNKIQDVVNQQGNSLNHLTS---QLRQNFQA---ISSSIQAIYDRLDTIQS |
7 | 1eq1A | 0.10 | 0.10 | 3.67 | 0.85 | Neff-PPAS | | GGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQESQKLAKEVASN--MEETNKKLAPKIKQAYDDFVKHAE |
8 | 5zhyA | 0.09 | 0.05 | 1.74 | 0.68 | HHsearch | | -----------------------------------------------------------------KILAASFNKAMTNIVDAFTGVNDAITQTSQAL-QTVATALNKIQDVVNQ----------QGNSLNTILNLTSEISTLENKSAELN- |
9 | 4tqlA1 | 0.11 | 0.10 | 3.62 | 0.65 | SP3 | | --------YKQMVQELEKARDRMEKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDE--LLEKIKKNIDDLKKIADLIKKAEENIKEAKKIAEQLVK |
10 | 4widA1 | 0.11 | 0.11 | 3.86 | 0.71 | PROSPECTOR2 | | KDMALQHAVDLLEKMLADEEKLTEFNLGDPLFESANDDPIKTLEEIIQEGDDVVGAHQLVVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDDANHDGLELIKKLDEQKEVAFHVNNFTHLVTTLGMALEAMLG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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