Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | QQARDIGGSTAFSPTDVARTQDTLARSGYDADAILAATEPTVNLSLASGVDIAEAADIVTNMQSAFNLPLDQIKRVSDVMAKGFTSSNTNLLELGEAMKYVAPIAEAAGASIEDTTALLGVLADNGIKGSMAGTSTSAVFSRLQAPVGKAPEALRELGITTRDGKGNMLPVEKILKDINRSFKKNKLGTAQQAEYLKVIFG |
1 | 4yxxA | 0.18 | 0.16 | 5.19 | 0.84 | SPARKS-K | | LKILKVAAELGTTEEAVKRALKLKTKLGVS----LEQALKILEVAAELGTTVEEAVKRALKLKTKLGVS----LEQALKILEVAAKLGTTV---EEAVKRALKLKTKLGVSLEQALKILKVAAELGTTVEEAVKRALKLKTKLLEQALKILEVAAELGTTV----------EEAVKRALKLKTKLGVSLEQALKILEVAAK |
2 | 4yxxA | 0.18 | 0.17 | 5.50 | 1.26 | FFAS-3D | | -KILKVAAELGTTVEEAVKALKLKTKLGVSLEQALKILEVAAEL----GTTVEEAVKRALKLKTKLGVSLEQALKILEVAAKL----GTTVEE---AVKRALKLKTKLGVSLEQALKILKVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILEELGTTVEEAVKRALKLKEQALKILEVAAKLGTTVEEAVKRALKL-- |
3 | 4yxxA | 0.18 | 0.13 | 4.38 | 0.28 | HHpred | | --ALKLKTKLGVSLEQALKILEVAAELGTTVEQALKI----LEVAAKLGTTVEEAVKRALKLKTKLGVSLEQALKIL-K---VAAELGTTVE---EAVKRALKLKTKLGVSLEQALKILEVAAELGTTVEEAVKRALKLKTKLGVSLEQALKIAAKLGTTVEEA------------------------------------- |
4 | 2yfaA | 0.07 | 0.07 | 2.88 | 0.80 | MUSTER | | NGDDTAAANTLAKLDAFSKQQAYLATT-FKSPENVKLLGELGDTISAYKNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQ |
5 | 5cwbA | 0.17 | 0.14 | 4.59 | 0.77 | CNFpred | | --------------RRVAEKVERLKRSGTSEDEIAEVAREISEVIRTLGSSYEVICECVARI----------VAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSSARIVAEIVEALKRSGTSEDEIAEIVARVISEV-------IRTLKESGSSYEVIK---ECVQRIVEEIVEALKRSGTSEDEINEIVRRVKS |
6 | 4yxxA | 0.13 | 0.12 | 4.11 | 0.57 | HHsearch-2 | | EQALKVAAELGTTVEEAVKALKLKTKLGVSLEQALKIL----EVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILE-V---AAKLGTTVE---EAVKRALKLKTKLGVSLEQALKILKLKTKLGVSLEQALKILEVA-AELGTTVKRALKLKTKLGVSLEQALKILEV-AAK-------L---GTTVEEAVKRALKLKT |
7 | 2yfaA | 0.11 | 0.11 | 3.95 | 0.93 | Neff-PPAS | | -SHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVK |
8 | 4yxxA | 0.14 | 0.12 | 4.10 | 0.71 | HHsearch | | EQILKVAAELGTTVEEAVKALKLKTKLGVSLEQALKIL----EVAAELGTTVEEAVKRALKLKTKLGVSLEQALKILE-V---AAKLGTTVEE---AVKRALKLAAELGTTVEEAVRALKLKTKLGVSLEQALKILEVA-AELGTAVKRALKLKTKLGVSLEQALKILEV-AAKL----------GTTVEEAVKRALKLK- |
9 | 4fp9B | 0.14 | 0.13 | 4.43 | 0.84 | SP3 | | ERVMSSLLDMGFSNAHINELLSVR--RGASLQQLLDIISEFILLG----LNPEPVCVVLKKSPQLLKLPIMQMRKRSSYLQKLG----LGEGKLKRVLYCCPEI---FTMRQQDINDTVRLLKEKLFTVQQVTKILHSCPSVLREDLGQLEYKFQYAGIKHPDIVKSQYSLTKIKQRHIYLERLGRYQTPDKKGQLKDILR |
10 | 2yfaA | 0.10 | 0.10 | 3.82 | 0.89 | PROSPECTOR2 | | GSHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKAENSSANEQAALRQLTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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