>PF10129 (357 residues) RDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNYGFSDAADLFVFISGYTASFVYAKMML ERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEFNVAGLIANPIE TLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRKPDAVMIGSLVLYFAARYFEWNL QSFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIDSRGMLWFCLAYLVFALVMTMAG RFQDFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWKGLEWRVFDPLI KCGQQSLAVFCVGVFLSFVAHFELTMSSGSLLAQILVSVVGIALMTVVAYYISWSKQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNYGFSDAADLFVFISGYTASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEFNVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRKPDAVMIGSLVLYFAARYFEWNLQSFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIDSRGMLWFCLAYLVFALVMTMAGRFQDFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWKGLEWRVFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSGSLLAQILVSVVGIALMTVVAYYISWSKQ | |||||||||||||||||||
1 | 6ei3A2 | 0.08 | 0.08 | 3.01 | 1.23 | SPARKS-K | QIPFIIGNEACERFSFYGMRNILVQFLIAPERDAEAKHILHSFMIGVFFSLIYCAGHACLALFEDSRSGFFVGLGLIAFGAGGIKPLVASFMVDQFDSNKHRAKVVFDAFYWIINFGSLFASLLIPLALKHLGPSWAFGIPGILMFIATAVFWLGLPPKVTPFFSLFDQKASTWVLQGREMRMPAWFSQMQALNPLLVMLLIPFNNLVLYPLLRRLTSLRRMTSGIAFSGVAWIAVGAIQVAMDGGE-----------PMHIAWQILPYALLTFGEVLVSATGIEFAYSQAPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRVTSHIADTGLSEAAFLMFFFAAFAFLAALAFGLYAR | |||||||||||||
2 | 5y78A | 0.07 | 0.06 | 2.32 | 1.33 | FFAS-3D | -----TLVHTLKVGFYFF-----------------------LWYFFN---FIFNIANK-----------RTLNMWKYPWVLSTIQLGVGALYCTFLWVLPNVSKKLIKALIWPSLGHTLGHAATCMSFSLVA-----ISFTHVVKSAEPVFGAVGSFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFA-------LLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEV----------SYLCLDNVSPVSFSIGTIKRVIIIFGSILVFRTPVTR-----LNFIGSTIAIIGTMLYSLAKA | |||||||||||||
3 | 6ei3A | 0.08 | 0.08 | 3.18 | 1.03 | MUSTER | NKHRAKVVFDAFYWIINFGSLFASLLIPLALKHLGWAFGIPGILMFIATAVFWLGRKRYVRVDPHGFGAVVRSALLA-PGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDAAVDGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDGGEPMHIAWQILPYAL----LTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRNATVTSHIADTGLSEAAFLMFFFAAFAFLAALAFGLYARRYR | |||||||||||||
4 | 3rkoB | 0.09 | 0.08 | 3.17 | 1.77 | CNFpred | DGLSLTMLSVVTGVGFLIHMYASWY-SRFFAYTNLFIASMVVLVLADNLLLMYLGWEGV-----GLCSYLLIGAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAMLMWATLMLLGGAVGKSALPLQTWLADAMAGPTPVSALIHAAT-----MVTAGVYLIARTHGLFLMTP-----EVLHLVGIVGAVTLLLAGFAALVQT------DIKRVLAYSTMSQIGYMFLALGVQ-------AWDAAIFHLMT------HAFFKALLFLASGSVILACH-FKMGGLRKSIPLVYLCFLVGGAALSAAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHG | |||||||||||||
5 | 6ei3A2 | 0.08 | 0.08 | 3.03 | 1.25 | Neff-PPAS | APERDAEAKHILHSFMIGVFFFPLLGGWLADRFFG-----KYTTIIWFSLIYCAGHACLALFEDSRSGFFVGLGLIAFGAGGIKPLVASFMVDQFDQSNKHRAKVVFDAFYWIINFGSLFASLLIPLALKHLGPSWAFGIPGILMFIATAVFWLGRKRPFFSLFDQKASTWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDGGEPMHIAWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRNATVTSHIADTGLSEAAFLMFFFAAFAFLAALAFGLYARRYRM | |||||||||||||
6 | 5y78A | 0.07 | 0.06 | 2.52 | 1.31 | PROSPECTOR2 | SPTLVHTLKVFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLRTKPNVS-----KKLIKALIWPSLGHTLGHAAT-------------------------------CMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLV------SAIAGVSKAKLFGSIMFCSLFYHLYNE----------VSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAK-LP | |||||||||||||
7 | 3l1lA | 0.10 | 0.10 | 3.61 | 1.22 | SPARKS-K | -AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFYMAAIQSTLNVTLWSFISASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPGDAARMALAIVSFCAAAGCLLAGQTAKAAADDGLFPPIFAR--VNKAGTPVAGLIIVGILMTIFQLSISPNATKEFG---------LVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAAYLAVTTIAFLYCIWAVVGSGAKEV | |||||||||||||
8 | 5t77A | 0.09 | 0.09 | 3.27 | 1.31 | FFAS-3D | -------LFSSILFSIFFSRILGLFRDVLFAKYFGVSYELDAYFIFPFFLRKVFAFVPLYSEKSGEEKDKFLSSVINGFSLIILALVILSYIINLFGAGSSHETKILAKKLLLITSPFLWAISYSILNTNNKFFWPALTPSISNITIIIGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIKHKYYFTIKHFPHFLKLFFPTFMTMVVSQINTVVYDKGSISYLQYASRFYLLPYGLFAV-----SVSTVVLSKISNDRKNFNYHLNDALKTTLFFTIPSMVG-------LIFLSTPIIRFTSKILIAYLPFYGIYSTISRSYHAIKNTKTP-FIAATIVSLSNIILDIIF----- | |||||||||||||
9 | 4he8F | 0.11 | 0.10 | 3.47 | 1.73 | CNFpred | DNLSGFMLLIVTGVGFLIHVYAIGY-SRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGV-----GLASFLLIGSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEA-LLALAGLLLFLGAVGKSAIPLMVWLPDAMAGPTPVSALIHAAT-----MVTAGVYLIARSSFLYSVLP-----DVSYAIAVVGLLTAAYGALSAFGQT------DIKKIVAYSTISQLGYMFLAAGVG-------AYWVALFHVFT------HAFFKALLFLASGSVIHALGEQDVRKMGGL-TRWHALIGALALGGFWSKDAILAATLTYPFGGVGFYVGALLVAVLTAMYAMRWFVLVFLGEE | |||||||||||||
10 | 5ezmA1 | 0.09 | 0.07 | 2.79 | 1.23 | Neff-PPAS | --VGPDEGRYAEISREMFASGDWVTIRYNALKYFEKPPFHMWVTVVGYELFG--------------------LGEWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHF---------NTLDMTLAGVMSCVLAFMLMGQHPRRGWMVACWAAMGVAILTKG-------------LVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIHEHWQRRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMRARF--------------RPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRL------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |