>PF10092 (329 residues) IVGFCGFYVAKADTKLFNRASQVVLVRDGDRTVMTMANDFEGEPKEFAVVIPVPTFLTRE QIHVGEKALVDHLDAYSAPRLVEYFDQNPCERREYRLALPMSAARASGAAQDSASLAKAL GVTIEAQYTVGEYDILILSAQQSSGLETWLRQNGYRIPPGASEVIGSYLKQNMRFFVAKV NLAEQSRLGFSYLRPLQVAYESPKFMLPIRLGMVNANGPQELFVYALTRNGRVETTNYRT AKLPADMDLPVYLKQPNEFAAFYKAMFTRQVENQDGSAVFLEYAWDMKWCDPCAADPLSN DELRRLGVFWIDVHVRYDNAHFPEDLVFQ |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IVGFCGFYVAKADTKLFNRASQVVLVRDGDRTVMTMANDFEGEPKEFAVVIPVPTFLTREQIHVGEKALVDHLDAYSAPRLVEYFDQNPCERREYRLALPMSAARASGAAQDSASLAKALGVTIEAQYTVGEYDILILSAQQSSGLETWLRQNGYRIPPGASEVIGSYLKQNMRFFVAKVNLAEQSRLGFSYLRPLQVAYESPKFMLPIRLGMVNANGPQELFVYALTRNGRVETTNYRTAKLPADMDLPVYLKQPNEFAAFYKAMFTRQVENQDGSAVFLEYAWDMKWCDPCAADPLSNDELRRLGVFWIDVHVRYDNAHFPEDLVFQ | |||||||||||||||||||
1 | 1p35A | 0.11 | 0.09 | 3.07 | 0.86 | SPARKS-K | ----C-VIFPVE-----IDVSQTIIRDCQQTRELVYINKIMNTQKPVLMMFNISGPIRSVT-RK---------------------NNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKY------FKDEHYSVSCQNGSVKSKFAKILKSHDYT-DKKSIEAYEKYCRNDYYVAVCVLKP----GFENGSNQVLSFEYNPNKVIVPF-AHEINDTGLYEYDVVAYVDS------------VQFD-------------GEQFEEFVQSLYNEASKNKSMIYKALEFTTESSWGKSEYDKKS----KVLYVKLHNVTSA--LNKNVILN | |||||||||||||
2 | 2w0iA | 0.12 | 0.05 | 1.63 | 0.54 | FFAS-3D | ---------------------------------------------------------------------------------------------------------------------------------------------------------SMPLQPEAQRALQQLKQKMVNYIQMKLDLEREVHTEPTDVAQLPSRVPRDAARYHFLYKHTHEGDPLESVVFIYS---------MPGYKCS--------IKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDG--------AELTAEFLDD------EVH--------------- | |||||||||||||
3 | 1fyeA | 0.10 | 0.05 | 1.81 | 0.32 | HHpred | ---------------------------------------------------------------LPGKHALPLIANQLNRSAVFIPFAGVTQTWDEYTD---K----------TAEVLAPLGVNVTPLAAIEKAEIIIVGGGNTFQLLKESRERG------LLAPMADRVKRGALYIGW--SAGANL-ACPTIRTT------NDM---PIDPNGFDALDLFP---LQINPH---------------------F-------TNTREQRIRELLVVAEGNWIQVSN-GQAV----------------------------------------- | |||||||||||||
4 | 1p35A | 0.12 | 0.10 | 3.56 | 0.70 | MUSTER | ----C--VIFPVEID-VSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKV----DEQFDQLERDYSDQMDGFHDSIKYFKD-----------------------HYSVSCQNGSVKSKFAKILKSHDYTDKKSIEAYEKYCLPKDYYVAVCVLKP----GFENGSNQVLSFEYIGNKVIVPF-AHEINDTGLYEYDVVAYVDS--VQFDGEQFEEFVQSLILPSSFKNSEK-------VLYYNEASKNKSMIYKALEFTTESSWGKSEKYNWKIFCKKSKVLYVKLHNVTSA--LNKNVILN | |||||||||||||
5 | 5dygA | 0.09 | 0.06 | 2.30 | 0.87 | CNFpred | -----VVSLSQPELQLF-RGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNR---------------VVRNNLRVRLGDVISIQP--------------------------------------CPDVKYGKRIHVLPIDDTV----------EGITG-NLFEVYLKPYFLEAYRPIRKG--------------DIFLVRGG--MRAVEFKVVETD-----PSPYCIVAPDTVIHCE-REDEEESWNEVGYDDIGGCRKQLAQIKEMVELPLRHP-PPRGILLYGPPG-----TGKTLIARAVANETGAFFFLINGP------------- | |||||||||||||
6 | 2kngA | 0.19 | 0.03 | 0.88 | 0.43 | HHsearch-2 | -------------------------------------------------------------------------------------------------------SG----SG--RGRGAI-------------------DREQSAAIREWARRNGHNVSTRPADVIDAYHAATLHH---------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3txaA1 | 0.08 | 0.07 | 2.82 | 0.78 | Neff-PPAS | KDNRVALVTYASTIFDGTEATVSKGVADQNGKALNDSVSWDYHK----TTFTATTHNYSYLNLTNDANEVNILKSRIPK--------EAEHINGDRTLYQFGATFTQKALMKANEILETQSSN--------ARKKLIFHVTDGVPTMSYAINFNPYISTSYQNQFNSFLNKIPDRSGILQEDFIINGDDYQIVKGDGESFKLTTQAAYRVPQNQLSVMSNEGYAINSGYIYLYWRDYNWVYPFDPKTKKVSATKQIKTHGEPTTLYFNGNIRPKGYDIFTVGIGVNG---DPGATPLEAEKFMQSISSKTENYTNVDDTNKIYDELNKY | |||||||||||||
8 | 2kngA | 0.17 | 0.03 | 0.90 | 0.57 | HHsearch | -------------------------------------------------------------------------------------------------------SGS---G---RGRGA-------------------IDREQSAAIREWARRNGHNVSTRPADVIDAYHAATLEHHH----------H--HH----------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2d2jA | 0.06 | 0.05 | 2.22 | 0.61 | SP3 | PEFF------GSRKALAEKAVRGLARAAGVQTIVDVSTFDIG----------------------RDVRLLAEVSRAADVHIVAATGLWFDPPLSMRMRSVEELTQF--FLREIQHGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTSASQRDGEQQAAI----------FESEGLSPSR-----------------VCIGHSDDTDDLSYLTGLAARGYLVGLDRMPYSAIGLEGNASALALFGTRSWQTRALLIKALIDRGYKDRILVSWLFGFSSYVTNIMDVMDRINPDGMAFVPLRVIPFLREKGVPPETLAG | |||||||||||||
10 | 3wlaA | 0.07 | 0.06 | 2.52 | 0.82 | PROSPECTOR2 | SEWAC-------PEGFTPKAGLNTDFPSDGKKRAFVVVPPKDSAGGAPVWVPMVGTVEATNWNLNVPRSNAKLAEHGVRQCAEQDPNLGAGACNGVGKDGWTWNPWNDGRAPDASGDKYKTD----------------AGDDVRFLEAMVRCTKWKLDRKTNRALLFDSEFWAGGMPIYSTKDDGSTVPFQETRKMVAAAPAKIWQGRVGPYPLPSKLDPMVVITVWGGEKDLWDCGPPLGLCSD---------------YRPTTQASSNYFSSISNVVHVACSATHGHMWPQVNTDAFNLWALN---TMASHPKGSSPKDFKLTDHYK | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |