Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FIHITTSVVALVIGPFTLSKKFREKNINSHRIVGRIYIVGILLGGISGLYLAFYATGGLVAKLGFGLLSVFWLTSAYQALIRIKNKKIQDHRNWMIRNYSLTFAAVTLRIWLPLFVVLFGLEQFERSYAVISWLAWVPNLIIAELFI |
1 | 5kbwA | 0.12 | 0.12 | 4.29 | 1.13 | SPARKS-K | | SSIKKISFVGIFSALATLVMFLEFPIFPPALIVSFLLPGVGMFVVLVKDILFFLMKSG--DPVGIAMNAVLGMSFVGIAGLIYHRNKSRATAIKGMIVATLFATAFALGLNALIVPLYFEAPKFFPFILAFNLVKFGIDSVVTFFVY |
2 | 4o6yA | 0.16 | 0.16 | 5.21 | 1.08 | FFAS-3D | | --HPVMMVIGLFNGEAMLAYKSKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKFYSLHSWLGLACLFLFAFQWAAGFVTYSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQSTEAMLVNTMGVLILILGGFVILGVV |
3 | 3rkoC | 0.07 | 0.07 | 2.82 | 1.08 | CNFpred | | LMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ--TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH |
4 | 5zleA | 0.08 | 0.08 | 3.19 | 1.23 | HHsearch-2 | | NWHPVLMVTGFVFQGIAIIV-YRLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNANMHSWVGLIAVI-CYLLQLLSGFSVFLPWPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTSLRPAYPPEGVFVNTLGLLILVFGAIVTR |
5 | 5aymA2 | 0.13 | 0.13 | 4.48 | 1.03 | Neff-PPAS | | IGLFRGLGAVFGLISTVSFPYLVRRLG-LISSSRWHLGFQGVTLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELRQRLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTEDFKYLVYVSLAAVLLANVVFIKWSS |
6 | 5zleA | 0.12 | 0.07 | 2.66 | 1.06 | HHsearch | | SLHSWVGLIAVICYLLQLLSGFRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRPPEGVFVNTLGLLILVFGALIFWIVTRPQWKRPKE-------------------------------P---------------------- |
7 | 3ayfA2 | 0.06 | 0.06 | 2.61 | 1.09 | SPARKS-K | | IILVVGMLLWLFIVFRGVKRGLKRESDKG---GLIHLLFYSAIAVPFFYIFAFFIQPDTNFTMADFWRWWIIFEVFAVVVIGFLLVQLKSTVRALYFQFTILLGSGVI----GIGHHYYYNGSPEVWIALGAVFSALEVIPLTLLIL |
8 | 5zleA | 0.10 | 0.10 | 3.56 | 1.04 | FFAS-3D | | --HPVLMVTGVFIQGIAIIVYRKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNMYSLHSWVGLIAVICYLLQLLSGFSVFLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSYSTFPPEGVFVNTLGLLILVFGALIFWIVT |
9 | 3rkoB | 0.07 | 0.07 | 2.80 | 1.08 | CNFpred | | MLMWATLMLLGGAVGKSAQLPLQTWLADAMPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQT--DIKRVLAYSTMSQIGYMFLALGVQAWDAAIF---HLMTHAFFKALLFLASGSVILACH |
10 | 4o6yA | 0.09 | 0.09 | 3.37 | 1.06 | HHsearch-2 | | NVHPVMMVIGLILFNEAMLA-YKSLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGENFHSWLGLACLF-LFAFQWAAGFVTYWYGSRNSRAMPWHVFLGIALVTATTGILEKVTFLQVVITRYSTEAMLVNTMGVLIILGGFVILG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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