Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ALRDLFPRIPNTDRQIIIEHAFTRISQRASGKGEQPVGFSDDIPLARRVQLAVLAHIRHSHTRYDDLLKEAGWQAARKAVEELCLDILVKWR |
1 | 5cwbA2 | 0.09 | 0.08 | 2.93 | 0.75 | SPARKS-K | | VARIVAEIVEDEIAEIVARVISEVIRTLKESGSS-----------YEVIKECVQRIVEEIVEALKRSTSEDEINEIVRRVKSEVERTLKESG |
2 | 1wy0A1 | 0.12 | 0.12 | 4.20 | 0.66 | FFAS-3D | | -IFELIPEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDPLRAIYPAVAIELIHNYSLHDDIMDMDETVNMAILAGDLLFSKAFE-- |
3 | 2rpbA | 0.13 | 0.08 | 2.63 | 0.23 | HHpred | | -------------------------------------AVYNVSDFLMAIVKLAQTNLRAIIGEMDETLS--GRDIINARLREELDKITDRWG |
4 | 3nz4A2 | 0.11 | 0.11 | 3.89 | 0.79 | MUSTER | | VVSTLADECLPNDTKARLLYVAKAVPVYTYLESPC----DPTLPLLLGLKQSCFGSILALHKETDTLVDRLAEKRLSDRLENEMTAVRVLYE |
5 | 2zb9A | 0.15 | 0.13 | 4.39 | 0.47 | CNFpred | | TLYKWWP-----SKGALALDGYFHAVEDT-------LAFPDTGDVRADLLAQLRAFTHVMTTPGGRILTELYRQLYSAQRRALAAERLRHAR |
6 | 5axwA | 0.11 | 0.09 | 3.17 | 0.37 | HHsearch-2 | | ELTNLNSELTQEEIEQISNLKGYTGT----------------HNLSLKAINLILDELWHTNDNQIAIFNRKVVKRSFIQSIKVINAIIKKYG |
7 | 5cwpA1 | 0.10 | 0.10 | 3.59 | 0.66 | Neff-PPAS | | RAQEAAERTGDPRVRELARELKRLAQEAAEEVKR----DPSSSDVNEALKLIVEAIEAAVRA-LEAAERTGVRELARELVRLAVEAAEEVQR |
8 | 1otrA | 0.30 | 0.13 | 3.96 | 0.36 | HHsearch | | ILMDMFPAISKSKLQVHLLEN----N-----N-----------DLDLTIGL---------------LLKENDDKS----------------- |
9 | 5u07I1 | 0.16 | 0.14 | 4.72 | 0.75 | SP3 | | RLRER--GWDADLADAGARQVVLSVGKKSGIKLEKEKDSEAPLPVPAIDELAAIADEH-----RDAVAKEAAKKTPKGILADRITEVLKS-- |
10 | 3gziA2 | 0.07 | 0.07 | 2.76 | 0.47 | PROSPECTOR2 | | QLHKARRETRQESPAALLQTYYSVSKHPHFPRLLRIAGLDQSLPENAEVTKAFYEVVNFENIAIHCAQLSLTPDFLQLLAEQNTRLLQRGLD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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