Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MPLESYGVWKAKPVRYTYEDRHQDPVSPHLSLVFTDDEGTEGRAAINIKSGDHAESRLAYWTVPHFTHPITEKLDALNDSFQLLAGTSEQGPGGLALDYIRGNLFRRSDGRILEHDVEGPDNDILDELKPILDRAISADATVYIYGSRFSNGEGIHDIHMNQGNSRRWERDNGVFQDGGLIFRFEDHWEAVFIAFASQAVHTED |
1 | 3s94A | 0.17 | 0.17 | 5.47 | 1.05 | MUSTER | | SPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDTPDFTDIVLQLEDIPVEGYIYWTDDEVR--AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPM-YMYWTDWGEIPKIERAALD-GSDRVVLVNTSLGWPNGLALDYDEYWGDAKTD---EVMNTDG |
2 | 1npeA | 0.15 | 0.14 | 4.65 | 1.14 | Neff-PPAS | | ---GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV------DKVVYWTDI--SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPRGNLYWTDWNRNPKIETSHMD-GTNRRILAQDNLGLPNGLTFDAFSLCWVDAGTHRAECLNPAQ |
3 | 3tu8A | 0.15 | 0.13 | 4.47 | 0.68 | SPARKS-K | | SLEAQIRQAMKTGSTLTIEFDQANQKSPGLNVFLHPANG---GVRIDLDSNQGEPAKILWLPWKQGE-------------LQTLQPGSISTVDMLFFTYLSGKVFAGDGGPVWHIDAPVEANQFWRRMDEWMEDWEVGTDRQVAYLHRAGQSDSLWNLYLEGAAPSTYGRDNL----GGGIVTGRQQMSLYQLTYTLQQRKQ-- |
4 | 3u58A | 0.16 | 0.13 | 4.25 | 0.52 | FFAS-3D | | VGKNRFSFFEGRVV-YKSSTFQNQQDSKYFFITAQDANNQEINLSF--------------------WQKVDQSYQTLKVGYYFIGGEVKQFKNNLELKF------KFGDYQIIPKETLGGSGGSTLLISEVLK---TSKQYLSVLAQ-------VVDIQSSDKNIRLKICDNSCNQELKVVIFPDNKWY-YFNEFVRQIYNDE- |
5 | 2zxqA1 | 0.12 | 0.11 | 3.97 | 0.44 | HHpred | | ----RTVEINGTNIEDDVTFKKVSDTEATYTLKVKDEIDAVITVQITVK-----ANQLHLNVTKIKNNLSENAIQTLSQSLVSVRSS----QENAQFTGARPGNFAVTEDTNTDSDYGISGAGLSAGLWRVYATTQTGDASLGLASAPWYHRTVTDSKYAETALPAGDENEDGAWQDGAIAYRDIELVWRIAMNFGSQAQNP-- |
6 | 3s8vA | 0.12 | 0.11 | 3.95 | 1.03 | MUSTER | | SAPTTFLLFSQKSAINRMVIDEQP-------DIILPIHSLRNVRAIDY----DPLDKQLYWIDSRQN--MIRKAQEDGSQGFTVVV--SIQPYDLSIDIYSRYIYCEATNVINVTRLDGRSVGVVLKGEQDRPRAIVVNPE-YMYFTNLQERSPIERAALD-GTEREVLFFSGLSKPIALALDSRLFWADSDLR---ESSDLSG |
7 | 5a59A | 0.12 | 0.10 | 3.61 | 0.79 | CNFpred | | --------ITPEVTYKKINE-----TTAEYLMKLRDD-AHLINAEMTVRLQVV-DNQLHFDVTKI-QVTPGQKIDDESKLLSSISF------LGNALVSVSSD---QTGAKFDGATMSNNSGDDHIDVTNPMKDL--AKGYMYGFVSTD---KLAAGVWSNSQNSYGGGSN----DWTRLTAYKETVGNANYVGIHSSEWQWEK |
8 | 4exrA2 | 0.12 | 0.03 | 1.05 | 0.57 | HHsearch-2 | | IALKEQN---GIVKEWSLDK---DLDVTFYKIRIDKD-KNEYDIKVDSKKGT-----V-LKVEKE------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 3s94A2 | 0.16 | 0.15 | 5.03 | 1.10 | Neff-PPAS | | ---TELLLLARRTDLRRISLDTPDFT-----DIVLQLEDIRHAIAIDYDPVE----GYIYWTDDEVR--AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMGYMYWTDWGEIPKIERAALD-GSDRVVLVNTSLGWPNGLALDYDEYWGDAKTKIEVMNTDGTG |
10 | 4exrA2 | 0.12 | 0.03 | 1.05 | 0.44 | HHsearch | | IALKEQN---GIVKEWSLDK---DLDVTFYKIRIDKD-KNEYDIKVDSKKGT-----V-LKVEKE------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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