>PF10036 (249 residues) FERYLTALQFPRVGQLNIDDPKDFRSFVMWLEDQKIRFLPIEERQPLRKINAPDEWNRAY EKYKKDIKVPEHLKTKHEEVAWLLLYAIRLEYTDNAEQYRPLTGARKLQQESKKTNAPEV QSSNPFDSFDFTSADFEEGSWKLAERLGISYHPDHLVSLQAAAKVIKGAYNKEALKEPPP IAGQASFPIAQGSGMGLEKDQDLEQCARILRLLQIQNLRTLQTTINETIVSVQNVTADPR TDTKLGKVG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | FERYLTALQFPRVGQLNIDDPKDFRSFVMWLEDQKIRFLPIEERQPLRKINAPDEWNRAYEKYKKDIKVPEHLKTKHEEVAWLLLYAIRLEYTDNAEQYRPLTGARKLQQESKKTNAPEVQSSNPFDSFDFTSADFEEGSWKLAERLGISYHPDHLVSLQAAAKVIKGAYNKEALKEPPPIAGQASFPIAQGSGMGLEKDQDLEQCARILRLLQIQNLRTLQTTINETIVSVQNVTADPRTDTKLGKVG | |||||||||||||||||||
1 | 6e9eA | 0.11 | 0.10 | 3.60 | 0.68 | SPARKS-K | LIGKLRHWCVHSEEGYKLDLKDDFKNVLDVVYNRPVEEINNRNIQILGSVTDIAELVRSYYEFLKNMGFSKEYDSVRNKLYQMTDFILYTGYINDSDRADDLVNTLRSSLKE-----------------DDKTTVYCKEADYLWKKYR--------ESIREVADALDGDNIKKLSKSNIEIQEDK---LRKCFISYADSVSEFTKLIYLLTRLSGKEINDLVTTLINKFDNIRSFLEIMDELGLDRTFT | |||||||||||||
2 | 2ooeA3 | 0.12 | 0.08 | 2.69 | 0.88 | FFAS-3D | -----------------------------------------QEAQQV------DMWKKYI-QWEKSNPLRTEDQTLIKRVMFAYEQCLL-VLGHHPDIWYEAAQYLEQSSKLLAEKGDMNN-----------AKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH------------------------SIYNRLLAIEDYIQYMKFARRAEGIKSGRMIFKKAREDART-------- | |||||||||||||
3 | 2ve7B | 0.13 | 0.10 | 3.36 | 0.41 | HHpred | LCEFLTENGYAHNVSLQAPSVKDFLKIFTFLYG----FLCPS----Y-ELPD-TKFEEEVPRIFKDLGYPFALSHIVAALVWLIDCIKIHTAMKESS-WG----E-------------------ETEDGIMHNKLFLDYIKCYESFMSG--ADSFDEMNAELQSKLKDLFNVD--AFKLESLEAKNRALNE------Q-IARLEQERSTANKANAERLKRLQKSADLYKDRLGL--------------- | |||||||||||||
4 | 5cwmA | 0.12 | 0.10 | 3.70 | 0.74 | MUSTER | ----------------DPEDELKRVEKLVKEAEELLRQAKEKSEEDLEKLRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRI-SEEALERALRVAEEAARLAKRVLELAEKQGDPEVA---LRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVEL---VKRVAELLERIARESGSEEAKERAERVREEARELQERVKELR--ER----- | |||||||||||||
5 | 1h2tC | 0.09 | 0.06 | 2.32 | 0.65 | CNFpred | LESLICKVG----EKSACSLESNLEGLAGVLEADLPN--------------YKSKILRLLCTVARLL-------EKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKA-------------------NYNEAVYLVRFLSDLVN-----CHVIAAPSMVAMFENFVS--VTQEE---------DVPQVR-----RDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLK------------ | |||||||||||||
6 | 2pffB | 0.17 | 0.16 | 5.27 | 0.58 | HHsearch-2 | FDKKSNSALFRAVGEFTDDYFEELRDLYHVLVGDLIKFSAETLSELIRTTLDALEWPGELRSYLKGATHSQSWESVRKAITVLFFIGVR-CYEAYPNT-SLPPSILEDSLENNE-GVP----SPMLSISNLTQEQVQDYVNKTNSHLPAGKEKNPPQSLYGLNLTLRKAKAP-------SGLDQSRIPFSEKLKFSNRSHLLVPASDLINKDLVKSDLRVLSGSISERIVDC--IIRLPVKWSGLGVLT | |||||||||||||
7 | 5cwpA | 0.10 | 0.09 | 3.38 | 0.83 | Neff-PPAS | ------------------SDEEEARELIERAKEAAERAQEAAERTGDPRVELARELKRLAQEAAEEVKRDPSSSKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRN------PSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE----- | |||||||||||||
8 | 2ve7B | 0.12 | 0.10 | 3.41 | 0.74 | HHsearch | LCEFLTENGYAHNVSLQAPSVKDFLKIFTFLYG----FLCPSY-----ELPD-TKFEEEVPRIFKDLGYPFALSHIVAALVWLIDCIKIHTMKESS--WGE-ET-----------EDGI-----------MHNKLFLYTIKCYESFMSGA--DSFDEMNAELQSKLKDLFNVD--AFKLESLEAKNRALNE------Q-IARLEQERSTANKANAERLKRLQKSADLYKDRLGLEIRKIYGEKIFTNI- | |||||||||||||
9 | 6b1zA | 0.13 | 0.08 | 2.93 | 0.70 | SP3 | FINMVAMLGWSPADNKEIVSMDEMIKEF-----------DLNKAEKAKWFMSNEAILPEFKKVLAENNVEVSDEKALKIIGLMKERATF--VKDIYNDGKFFAPESFDEKASKKAAVLMQELTEAISSLDFKAEIIKESIHHLAEAKGLGMGPDVPDLMEMIKEETISRI-NKAIET------------------------------------------------------------------------ | |||||||||||||
10 | 5j65A | 0.09 | 0.08 | 3.24 | 0.78 | PROSPECTOR2 | HSLIRTHVNLSQDISIP-SDFSQLYDVYCWNKNLYPLIIKSANDFKVAGDPSIDGYFKKLQDELDNIVDNNSDDDAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGDQKKLEGVINIQ------KRLKEVQTALNQAHG--ESSPAHKELLEKVKNLKTTLERTIKAEQDLEKKVEYSFLLGPLLGFVSAQHDLDRDVKIIGMLNSTDIDNLYSQGQEAIKVFQKLTSNLEYKCPENNFW | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |