>PF10011 (376 residues) SSYWFVPTLMAASAIALAFTMLTLDRAGKSGPIEKLAWIYTGGPDGARTLLSTIAGSMIT VAGTAFSITIVALTLASSQFGPRLLRNFMQDTGNQVVLGTFIATFIYCLLVLRTVRGDDY NVFVPQISVTVGIVLAIASIGVLIYFIHHASTSIQAWHVITEVGSDLDKAIDRLFPQKIG YGGSGEKRRWVEEIPVGFDREASPILATSSGYLQAIDNDKLMKIAQSKDLLVRLKHRPGK FVVQGSELVRVWPGERVNKTLSQQLNEAFILGKQRTEQQDVEFCVNQLVEVAIRAISPAV NDPFTAIRCIDQLSAGLCRLAEREFPSPYRYDDDNNLRVIVDPVTFAKLTDDAFNQIRQY SKPDVAVRIRMLEAIA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SSYWFVPTLMAASAIALAFTMLTLDRAGKSGPIEKLAWIYTGGPDGARTLLSTIAGSMITVAGTAFSITIVALTLASSQFGPRLLRNFMQDTGNQVVLGTFIATFIYCLLVLRTVRGDDYNVFVPQISVTVGIVLAIASIGVLIYFIHHASTSIQAWHVITEVGSDLDKAIDRLFPQKIGYGGSGEKRRWVEEIPVGFDREASPILATSSGYLQAIDNDKLMKIAQSKDLLVRLKHRPGKFVVQGSELVRVWPGERVNKTLSQQLNEAFILGKQRTEQQDVEFCVNQLVEVAIRAISPAVNDPFTAIRCIDQLSAGLCRLAEREFPSPYRYDDDNNLRVIVDPVTFAKLTDDAFNQIRQYSKPDVAVRIRMLEAIA | |||||||||||||||||||
1 | 1azyA3 | 0.13 | 0.03 | 1.02 | 1.29 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMLTKAVYADTEGFVSEMDTRALGMAVVDYSVGFTDMARLGDQVDGQRPLAVIHAKDENWQEAAKAVKAAIKLADKAPESTPTVY--------------------------------------------------------------------------------------------- | |||||||||||||
2 | 3k07A | 0.13 | 0.11 | 3.97 | 1.05 | CNFpred | WHVRSALVAIISLPLGLCIAFIVMHFQG-----------------LNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLE-DNKTRWQVITDASVEVGPALFISLLIITLSFIPTLEGQE-GRLFGPLAFTKTYAMAGAALLAIVVIPILMGYW-LNRFLIRVYHPLLLKVLHWPKTT------LLVAALSVLTVLWPLNKVGGEFLPQNEGDLLYMP-QKTDKLIMSVPEVARVFGKTGKDSAMVETTIQLKPQE-TMDKIIEELDNTVRLP-------GLANLWVPPIRNRIDMLSTGIKSPIGIKVSIDAMAEQIEEVARTVGVASALAEREGGRYINVEI---------NREKAARYG-MTVADVQLFVTSAV | |||||||||||||
3 | 1azyA3 | 0.12 | 0.03 | 1.03 | 1.73 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMLTKAVYADTEGFVSEMDTRALGMAVVDYSVGFTDMARLGDQVDGQRPLAVIHAKDENWQEAAKAVKAAIKLADKAPESTPTVYRRISE---------------------------------------------------------------------------------------- | |||||||||||||
4 | 1azyA3 | 0.12 | 0.03 | 1.03 | 2.12 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMLTKAVYADTEGFVSEMDTRALGMAVVDYSVGFTDMARLGDQVDGQRPLAVIHAKDENWQEAAKAVKAAIKLADKAPESTPTVYRRIS----------E------------------------------------------------------------------------------ | |||||||||||||
5 | 2wk5B3 | 0.20 | 0.04 | 1.37 | 1.23 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AREQEELLAPADGTVELVRALPLALVLHRLGVGAELLVDVGQRLRRGTPWLRVHRDGPASGPQSRALQEALVLSDRPFAAPS------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 4fgvA | 0.09 | 0.09 | 3.23 | 1.04 | CNFpred | --KTIRECLVYLTHLDVVDMEQIMTEKLARQNCNVLCWAIG-NEETEKRFLVTVIKDLLGLTKAVVASNIMYIVGQY-KFLKTVVNKLF-HEGVQDMACDTFIKIAKQCRHFVALQPSENEPFIEEIIRNIGKIT-PQQVHTFYEACGYMVSAQQQERLLAELMAIPNAAWDEIIKAATMNPGILHEPDTIKIIGNIMKTNVSACSSIGPYFFPQILYNDMLQMYAATQLISEAVARDGEIATKMPKVRGLRT---IKKEILKLVETFVEKAE--DLQAVRSQMIPGLLDSVLVDYNRNVPG-ARDAEVLKAMTVIITRLQGL-------------MEDQVP-AIMENVFECTLDMINKDFAEYPEHRVEFFNLLR | |||||||||||||
7 | 2wk5B3 | 0.20 | 0.05 | 1.53 | 1.62 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AREQEELLAPADGTVELVRALPLALVLHRLGVGAELLVDVGQRLRRGTPWLRVHRDGPASGPQSRALQEALVLSDRPFAAPSF-AEL--------------VLPP------------------------------------------------------------------------- | |||||||||||||
8 | 2wk5B3 | 0.19 | 0.05 | 1.46 | 2.00 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AREQEELLAPADGTVELVRALPLALVLHRLGVGAELLVDVGQRLRRGTPWLRVHRDGPASGPQSRALQEALVLSDRPF-AAPSFAEL--VL------------PP------------------------------------------------------------------------- | |||||||||||||
9 | 5t0oA | 0.11 | 0.10 | 3.55 | 1.03 | CNFpred | KNFRATLIPMIAVPVSLLGTFAGLYVLG-----------------FSINLLTLFALILAIGIVVDDAIIVVENIDRILHEN--SVKDAAIQAMQEVSSPVISIVLVLCAVFVPVSFISGFGEIQRQFALTLAISVTISGFVALTLTPSLCALFL-FNDFFDWSTSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLYKAVPNSLVPEEDQGLMISIINLDHISQEVLKTNGVKDAMAMIGFDLF-NAAAMFIGLQD-SADQIIAELNKKFSVFIGLPPIPGLSITGGFEMYVQNKS-----KSYDEIQKDVNKLVAAANQRKE---LSRVRTTLDTFPQYKLII-DRDKLKHYNLN---------MQDVFNTMNATI | |||||||||||||
10 | 4ga4A3 | 0.18 | 0.06 | 1.82 | 1.17 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------HTVGP-----------ALEAREALSALM---TGKDPNIKP------EEIPIGDKTYTFTAATSGYVTAIDNRAITAIARAKGAGIELYVKVGEKVKEGDPLFTIHAEHEARDQAIVLARRTEPIRIEGMVLQRIGN--------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |