Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | DVIFLLDYGKSSVTGHAFGYKVSGRCKSDLNVIQIERPGEQDGSVVPWGNQVVKFAGEISRVLGLKIVTPEEIKAEMKDKTNCRQETGQDAIRICRKIAGVSPDENIFLNGIVVGRSTSSNVTLVAENGVITSITGGNLKKHGVEKLGEVDLENAIVKTGLLRRSKVKPRILKPIKYAKSENTFKWNVAYLNHAADDIYKLRGFDMVVTVGDDTTLVAAD |
1 | 5n2pA | 0.08 | 0.07 | 2.67 | 0.59 | SPARKS-K | | LVVYMTLGYPNVQSFKDFIIGAVENAD----ILELGIPPKYA-------KYDGPVIRKSYDKV--KGLDIWPLIEDIRKDVGVPI-----------IALTYLVKLDGILFPDIDGIIKNKGLKNV------IFTS-PSVPDLLIHKVSKISDLFLYYGVRP--TTGVPIPVSVKQLINRVRNLVENKLIVGFGDLRDALSA-GAD-GIAIG---TVFIEE |
2 | 2xhcA2 | 0.19 | 0.12 | 3.82 | 0.53 | FFAS-3D | | -YIVLTMSGYEEKVKENIEKKVEAT-GIKNLVGRIVIPEERRGYVFVEMIMNDEAYNFVRSVPYVMGVKDREMRPILRLAGLEEYELGFKVGDMVKIISGPFEDFA----GVIKEIDPERQLKVNVTIGRETPV---VLHVSEVEKI------------------------------------------------------------------------- |
3 | 3eeqA | 0.13 | 0.11 | 3.92 | 0.34 | HHpred | | ------------ALEGA-TRIVCKYATEDPAIVCIDDKI---NYVIPLLGGANDIARELSVILNSTPIITKLSIE-RIAN-ILIAKIIN-PENIVKINAALLRDESICICSYIISLRYKDKIVVWLKPLKISIGIGSKLERLNLKRERSIREE--------VKKIAVRFRLVNEEEINNMNPPPSK----TKGVAEISALAGNSKLILIAIRNSTAVA-- |
4 | 5b69A | 0.12 | 0.11 | 3.85 | 0.59 | MUSTER | | KVHMTLIDPGAKP-PQECARIAEEAEMAGTDFIMVGGSTDID------SRAMDEAISAIKAKTDLKVIIFPGSSLMISPKADAIFFMSLLNSGSLEYVVGHQVKAAIPLMKIPMAYLVFDPGMTVGRVGKAHLIPRDDE-KTALSAAQYFGFRLVYFEAGSGSPYHVGENVVRR------KQELDIPVIVG-RTPEAAKAL-GAD-MIVTG---TIAERS |
5 | 4haoA | 0.08 | 0.06 | 2.54 | 0.80 | CNFpred | | DLAVVVG---GDGNMLGAARVLARY---DIKVIGVNRG--NLGFLTDLDPNALQQLSDVLEG---------------------EYLSE-----QRFLLETHVRRISTAINEVVLHPG-MIEFEVYID-GLIIATP-TGSTAYSLSAGPILTPTLDAIVLVPMFP-TARPLVISSTIRLKFSHITSDLEISCDS--QIALPIQGEEVLIRRSDFHLNLIHP |
6 | 3eeqA1 | 0.20 | 0.05 | 1.75 | 0.32 | HHsearch-2 | | DAIVFVM-----ALEGAT-RIVCKYATEDPAIVCIDDKI---NYVIPLLGGANDIARELSVILNSTPIIT------------------------------------------------------------------------------------------------------------------------------------------------------ |
7 | 3cvzA | 0.09 | 0.08 | 3.08 | 0.67 | Neff-PPAS | | VGEVAPKSANKKADRDAAAEKLYNLVNTDGDYVDFSVDYNLENKIITNQADAEAIVTKLNSLNEKTLIDDTFGMVSKTQDSEGKNVAATKALKVKDVATFGLKSGGSEDTGYVVEMKAGAVEDKYGKVGDSTAGIAINLPSTGLEYAGKIDFNKTLKVDVTGGSTPSAVAVSVTKDDTDLAKSGTINVRVIN---------------------------- |
8 | 5uw2A | 0.10 | 0.05 | 1.84 | 0.47 | HHsearch | | --------------------------------------------------------------------------PT------YTL------YATFDNIGGLKARSPVSIGGVVVGRVADIT--LDPKTYLPR-V-TLEIEQRY-NHIPD-T-SSLSIRTSGLLGEQ-YLALNVG-FELGTAILKDGDT--IQDT-KSAMVLEDL-------------IG- |
9 | 4immA | 0.13 | 0.11 | 3.95 | 0.62 | SP3 | | STIFGLD----INSGATVTQVPNTSVRGMAKPLALDARGGADGRIHALDTMTGAPVWTR-------RVGLAMGSGEIDQLRDIDGTPTVVDH---YLYAASYSGQLAGFDGRTMFVSELSSTKLTTLADAVIGSS-----TDG--DVVAFNRM-----TGEKLWENHDLKYRGLTNPVTIGTDADGVVHILNHQGQSRANTKGALTNLTVINNRLYAQSA |
10 | 3g1pA | 0.08 | 0.08 | 3.18 | 0.73 | PROSPECTOR2 | | SLTLTLVPAWGCECAACARARRSPQYRRQPCSGVVKFND---AITLAGLHDLADRWSPVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGLLDFSHT-VEPFVVFDLQGLQVTPLPLNHGYLLETAHSRVAWLSAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFLMENALPSGFEVGFDGMEI--G |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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