Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VETIIGAIALLMAIRIFLTRSRARKLLYLCCLSFCISALIALYVNSPMGGIVAITYFICSTLSSNAIAYTIEQVK |
1 | 6cfwD | 0.14 | 0.13 | 4.57 | 1.31 | MUSTER | | IQFIVLGGIILSSVLMIVTRDLLVAVLASAAMSLLLSLEFYML--APDVAIAEAAVGAGVVTALVMYAISKTERW |
2 | 6cfwD | 0.12 | 0.12 | 4.20 | 1.06 | Neff-PPAS | | IQFIVLGGIILSSVLMIVTRDLLVAVLASAAMSLLLSLEFYMLH---APDVAIAEAAVGAGVVTALVMYAISKTE |
3 | 5gupl | 0.15 | 0.15 | 4.96 | 0.80 | SPARKS-K | | MTLCLGAITTLFTALCAITQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICMHAFFKAMLFMCSGSIIHSL |
4 | 3rkoJ | 0.19 | 0.19 | 6.00 | 0.86 | FFAS-3D | | --YICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFS-LGAYFAGALEIIVYAGAIMVLFVFVVMMLNLG |
5 | 6cfwB | 0.20 | 0.20 | 6.39 | 0.37 | HHpred | | -TLLIGIAGIITFIRLALGPTVPDRVVAVDTLNTLIVAIMLLAYERAIYIDIAIVYALLSYVGTLVIAKYLQGGL |
6 | 6cfwB | 0.20 | 0.20 | 6.39 | 1.30 | MUSTER | | ATLLIGIAGIITFIRLALGPTVPDRVVAVDTLNTLIVAIMLLLG-RAIYIDIAIVYALLSYVGTLVIAKYLQGGL |
7 | 3rkoC | 0.19 | 0.19 | 6.04 | 0.83 | CNFpred | | IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY |
8 | 6cfwB | 0.20 | 0.20 | 6.40 | 0.50 | HHsearch-2 | | ATLLIGIAGIITFIRLALGPTVPDRVVAVDTLNTLIVAIMLLAYERAIYIDIAIVYALLSYVGTLVIAKYLQGGL |
9 | 6cfwB | 0.20 | 0.20 | 6.40 | 1.06 | Neff-PPAS | | ATLLIGIAGIITFIRLALGPTVPDRVVAVDTLNTLIVAIMLLLGERAIYIDIAIVYALLSYVGTLVIAKYLQGGL |
10 | 6cfwD | 0.17 | 0.16 | 5.28 | 0.61 | HHsearch | | IQFIVLGGIILSSVLMIVTRDLLVAVLASAAMSLLLSLEFYMLHAPDVAIAEAAVGAGVVTALMYAISKT--ER- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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