Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VEQTWFVLVELLTDLRKRDVDVPTSITEDVRLVRTSINFYKSDPENPEMMKELKRINDMLNSIQEELLELAETVSSDYPAQWIEKLKRAARGEEVHRPPQTKSKFIVGAPPGFAAARVHLREPLAEDRVQDIAETHSLIIEFEEDDLIAIYGDSEDIKKGLREIGSFFR |
1 | 5t5sA | 0.08 | 0.07 | 2.78 | 0.75 | SPARKS-K | | AESLKKCLSVMEAKVKAQTAP-NKDVQREIADLGEALATA----VIPQ--WQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDSNPNQP-----------------LVILEMESGATAKALNEALKLFKLFTVDNEAGTCLCQVPQNAANEWVQQVSGLMD |
2 | 4fl0A1 | 0.13 | 0.12 | 4.11 | 0.92 | FFAS-3D | | INRRELEHIEKLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRASNIAQAGGLACLSSGGLKEIRSVNN-----YYKENRKILMDTLV----------SLGLKVYGGVNAPYLWVHFKGSKSWDVFNEILENTHIITVPGGEEYLRISGRRDHIVEASKRLQNFFN |
3 | 2d6fD | 0.16 | 0.13 | 4.33 | 0.34 | HHpred | | ------------FRLDRLGMSDPQQLREVAYQIGQILRSTRVKRGLGTILDLIPEIVEREVKRQLSLVEIRDTL------------Q--ERGAVVSVFADTESRIISGVSGIFHTDE-LPAYGITEEEVRGLRDAVGAS---QGDAVVMVAHERVTAENALREVIRRA- |
4 | 4tqlA1 | 0.12 | 0.11 | 3.73 | 0.79 | MUSTER | | YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQL-KEEMKKMKEKMEKLLKEMKQRMEEVKKKM------DDELLEKIKKNIDDLKKIAEDLIKKA-----------------EENIKEAKKIAEQLVK |
5 | 3aovA | 0.13 | 0.09 | 3.31 | 0.59 | CNFpred | | ------IIRKMEIAKQSTDL------CTNVFGQVVAWRYVDG----GYLEKHIPEIRKFYKPRRDAMLEALEEFMPEG------------------------VKWTKPE--GGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEKNTMRLNFDEDKIMEGIKRLAETIK |
6 | 2yqrA | 0.12 | 0.05 | 1.66 | 0.32 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------GS---SGSSGGMHYVKLFVGLEHPKSYLQHIQIETGAKVFLRGKMYIYISHKPEGLAAAKKLCENLLQ |
7 | 5cwmA | 0.15 | 0.15 | 4.99 | 0.75 | Neff-PPAS | | AEEAAREAKKVLEQAEKEGDEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKLERIARESGSEEAKERAERVREEARELQERVK |
8 | 6qh2A1 | 0.18 | 0.06 | 1.92 | 0.48 | HHsearch | | -----------------------------------------------------------------------------------------------------------------RIHTIKINPDKGGSVIRALTEETGTTIEIEDDGTVKIAATGEKAKHAIRRIEEIT- |
9 | 4tqlA1 | 0.15 | 0.14 | 4.57 | 0.65 | SP3 | | YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQL-KEEMKKMKEKMEKLLKEMKQRMEEVKKKM-------DDELLE-KIKKNI--DDLKKIAED--LIKKAEE----NIKEAKKIAEQLVKRAKQLIE |
10 | 5t5sA | 0.11 | 0.09 | 3.44 | 0.73 | PROSPECTOR2 | | AERKAESLKKCLSVMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKD---ELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDS-----------------NPNQPLVILEMESGATAKALNEALKLFKLFTVDNEAGKITCLCLQEALQLATSFAQLRLG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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