Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MGNLHFPNEVGLSTFEIRDGHRSVLDVTIEIFPTKLTYKQDYQRLLDEVSEEIYNLAFHFIKRTYQRARAKRDDAPSRSEFFRLMEAHISDFLHAIRHIERQPHHQLSTVHVRVRGDQLGRLDAAGRNDLRKRPHVFRDVKRGIDIGSRTVMPQSGLKAKKELTYDTLENRFVKWMMTRLVEKLLDLFEHVQGKQRRYETEPDPGLLERIQSMIRALETRLRHSFWRPIGRLDRSVMSLVLQMAPGYRDAYQLF |
1 | 5k7vA | 0.09 | 0.07 | 2.74 | 0.72 | SPARKS-K | | AADNKTTEKAVAEAIEEIARLATAAIQLIEALAKNLASEEFMARAISAIAELAKKAIEAIYRLAD-----NHTTDTFMARAIAAIANLAVTAILAIAALASN----HTTEEFMARISAIAELAKKAIEAIYRLADNHTTD------------------------------KFMAAAIEAIALLATLAILAIALLASNHTT---EEFMAKAISAIAELAKKAIEAIYRLADNHTSP---TYIEKAEAIEKIARKA |
2 | 5ic0A2 | 0.11 | 0.07 | 2.54 | 0.88 | FFAS-3D | | --------------------------------------QLECETAIAALNSCLRDL--DQASLAAVSQQLAPREGISQEALHTQMLTAVQEISHLIEPLASA------ARAEASQLGHKVSQMAQYFEPLTL-----------------------AAVGAASKTLSHPQQMALLDQTKTLAESALQLLYTAKEGNPKQAAHTQEALEEAVQMMTEAVEDLTTT--LNEAAS----------------------- |
3 | 2pffA1 | 0.11 | 0.08 | 2.85 | 0.29 | HHpred | | ----------------------------VLITGGKGS-------IGAE---VLQGLLQGGAK---VVVTTSRFSKQVTDYYQ---------------SIYAKYGAK-GSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLG----WDLDAIIPFAIPEQGIELEHIDSKSEFAHRIMLTILRMMGCVKKQKSARETRNHFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIGWTGLMSANN--------- |
4 | 1st6A | 0.10 | 0.09 | 3.40 | 0.72 | MUSTER | | RALALIDSKMNQAKGWLRDPNAPPGDAGEQAIRQILDEAGKAGECAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARK----------LEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGK--GDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQGVGQAAIRGLV |
5 | 5nroA | 0.11 | 0.08 | 2.87 | 0.67 | CNFpred | | IAVYDLGGAFDISIIEIDEVGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRN-----------------DPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADA-------------------------------------TGPKHMNIKVTRA-KLESLVEDLVNRSIEPLKVALQDAGL----SVSDIDDVILTRMPMVQKKVAEFFGKEPRKDV------NPDEAVAIGAAVQGGVLTG |
6 | 1vt4I3 | 0.15 | 0.08 | 2.78 | 0.65 | HHsearch-2 | | ----------------------------------------EYALHRSIVDHY-------NIPKTFDSDDL---IPPYLQYFYSHIG-------HHLKNIEHPERMT------------LFRMVFLDFRFLEQKIRHDSTAWNAS-----------------GSILNT--LQQLKFYKPYICD-------------------NDPKYERLVNAILD---------FLPKIEENLICKYTDLLLMAEDEAIFEEAH |
7 | 5cwmA | 0.09 | 0.08 | 3.11 | 0.89 | Neff-PPAS | | --------------------EDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGD-PEVALRAVELVVRVAELLLRIAKESGSEEALERALRV-AEEAARLAKRVLELAEKQG-------DPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER- |
8 | 2lxtC | 0.22 | 0.02 | 0.62 | 0.35 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSVTDSKRREILSRRP-YRKILND- |
9 | 5no8A | 0.09 | 0.07 | 2.89 | 0.74 | SP3 | | FVEVPME-QAGEVRFDFYYNGNKQTHADCLVIS---NTADLIRKRVDFIRTRQDGAYMVYDNEGDSIYLNDTPNCNPMGVLLVKQYLLTPELKQSLLRYADFVRRKLQTDNYVTYSSVDQKNDKQFVTDGYKTLKSMFQQFGYGFYAIGIPVRL-GLQSLKEAGM--------KKEYTDLRNDFIKTGDVFVKNGLNYPANYEQSIVAPAIQFLAQLYLETG---------------------SQKYLDEVKRQ |
10 | 1eq1a | 0.10 | 0.07 | 2.46 | 0.71 | PROSPECTOR2 | | DA------------------------------PAGGNAFEEMEKHAKEFQKTFSEQFNSLVN-----SKNTQDFNKALKDGSDSVLQQLSAFSSSLQGAISDANGKAKEA-----LEQARQNVEKTAEELRKAHPDVEKEAN-----------------------AFKDK--LQAAVQTTVQESQKLAKEVAS----NMEETNKKLAPKIKQAYDDFVKHAE-----------------EVQKK--LHEAATKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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