Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | YSLSLGKSFDPKAKKNDAQFHTLRYDFKPSSVSNNADTFIAFGNSGDVHVSVPSEGDNMTVYKGPKKEAKPKECLLFFDKKTNTVRLEKITSNINVKKTR |
1 | 4ue0A | 0.17 | 0.16 | 5.25 | 0.72 | SPARKS-K | | FIIALGWQIIPS---NIRYIYILNCSFMPTSDVT----TIYFQADSGLESIFVMDSPFYASCTQQLPDKTIKTYGVTISKKQSIISINFLESAWTASITR |
2 | 4v1nQ | 0.11 | 0.10 | 3.62 | 0.62 | FFAS-3D | | FPLRA----IPKEDLENMRTHLLKFQSKINPVTDFHLPVRLHRKDYPWVME---DFDGYNTWVGSYEAGNSDSYVLLSVEDDGSFTMIPADKVYKFTAR- |
3 | 4v1nQ | 0.09 | 0.08 | 3.06 | 0.25 | HHpred | | FPLRAIPKEDL----ENMRTHLLKFQSKK-KINPHLPVRLHRK-DYPWVMEDFD---GYNTWVGSYEAGNDSYVLLSVED-DGSFTMIPADKVYKFTARN |
4 | 2xwxA2 | 0.10 | 0.09 | 3.36 | 0.75 | MUSTER | | YSLTV-SGLAKEYEIGEQP-IQLDLTLEAQG-EMSAELTVYNHHQKPLASWSQATDGELKSITLELSEAKAGHHMLVSR-RDGN---LQDQQTLDFMLVE |
5 | 1nqdA | 0.14 | 0.10 | 3.44 | 0.63 | CNFpred | | ---TMQGSLLGD---DSRDYYSFEVKE-------EGEVNIELDKEFGVTWTLHPE-GNKVSNKVKL---RPGKYYLLVYKGSGNYELRVNK--------- |
6 | 5fj8M | 0.18 | 0.16 | 5.21 | 0.53 | HHsearch-2 | | FPLKISGE--------EESLHVFQYANRPRLVGRKFISAARYKPSHLWEIDIPLDAVNVQTLKGVGVEN-NGQYAAFVKD--MQVYLVPIERVAQLKPFF |
7 | 6fwvA5 | 0.13 | 0.12 | 4.15 | 0.77 | Neff-PPAS | | -FFKVNPVDSQTATQNGDYLETGFYAVQTNA--VSGSYTILPENAPKGLRIVNENGEEKSTLSI------NEKFKILLPKDTSSGNFKKVKSTLTNSEKI |
8 | 2ffgA | 0.11 | 0.06 | 2.19 | 0.48 | HHsearch | | ----------------------------------SQLGIITRL----QSLQETAANEPQRYFEV----NGEKICSVKYFEKNQTFELTVFQKPNTYPFD- |
9 | 2creA | 0.09 | 0.06 | 2.29 | 0.68 | SP3 | | -----------GSSGSSGLLARALYDNCPDC-----SDELAFSRGDILTILEQHVPESEGWWKCLLHGRQANRLQILSGPSSG----------------- |
10 | 5e7fG | 0.11 | 0.11 | 3.97 | 0.49 | PROSPECTOR2 | | DVSVDGDFTMKKFADSYVAFFANKGSGNTVTFTAPWDCTAEVYSGGEWEIGITTPSGLTQIYEGHDNQAISMPTKAIYSKKGLQYTFDIRDANVKLYRNA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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