>PF09810 (369 residues) SPIERFRTQPKKALSVTDLVSPAWCELQYWYTLTKHGRKRRTPAMKQGSAVHKVLEDQVH TTVKVDIETKEDAWGLRIWNVIQGLKTLRDTGMTRELEIWGTVDGLVVNGVIDELSYICP DAELEESIEKPTTQDEPPPDQTTLTEFFKAEGSSIAEATRSKRRPQPKKVYLCDVKTRGV KSLPSASAFKPTKIQLMLYHRLLSLLATNTVDFSILTTRYNLDATRTFSDSFIAQVGSLN EEFFSAKTSQTSNSQSQGLDISQSSQDSTTILLAHNNLNSLWSLMINEFQITLPSGSASL GNVLKAEYRSRDTGEIVGAKAFMMDNDELTRYVEREMQWWKGEREPVGVVIEEAFKCRSC DFAESCEWR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SPIERFRTQPKKALSVTDLVSPAWCELQYWYTLTKHGRKRRTPAMKQGSAVHKVLEDQVHTTVKVDIETKEDAWGLRIWNVIQGLKTLRDTGMTRELEIWGTVDGLVVNGVIDELSYICPDAELEESIEKPTTQDEPPPDQTTLTEFFKAEGSSIAEATRSKRRPQPKKVYLCDVKTRGVKSLPSASAFKPTKIQLMLYHRLLSLLATNTVDFSILTTRYNLDATRTFSDSFIAQVGSLNEEFFSAKTSQTSNSQSQGLDISQSSQDSTTILLAHNNLNSLWSLMINEFQITLPSGSASLGNVLKAEYRSRDTGEIVGAKAFMMDNDELTRYVEREMQWWKGEREPVGVVIEEAFKCRSCDFAESCEWR | |||||||||||||||||||
1 | 3u44B | 0.13 | 0.10 | 3.59 | 1.08 | FFAS-3D | RSVSRQLYGERIQGSVSRMETFNACPFSHFASHLKERQFFKLEAPDIGQLFHSSLKERLAPKLQKEISNRHYYVKEKLQKIVTRVSGILSEHAKAELGFGGKGCTMELVGRIDRVDKAESS--------------------------------------------KGLLLRIVAYKS-SDKGLDLAEVYYGLALQMLTYLDLSI---------THSADWLGMRA------------------TPAGVLYFHIHDPMIQSNLPLGLDEIEQEIFKKFKMKGLLLGDQEVVRLMDTTLQEGRSNIINAGLKKRSDSAAVGEKEFDLLTKHVRRTFQEAGEITDGRVSIEPYKMKNKTPCTYCAFKSVCQFD | |||||||||||||
2 | 3l0aA | 0.13 | 0.07 | 2.54 | 1.00 | CNFpred | SGYKDFA----------GTYGKMPCEFYGMEKLNGRWEDEKSTALLVGSYVDSYFEGSL-PEIFTQ-LKANFKQAEEIIARIERDEYFMKYMGQKQVIMTGELFGAKWKIKMDSYIP---------------------------------------------------GVAIVDLKVMAS-GYLDFVRYWGYDIQGAVYQEIVRQNTG--------------------------------------------------------------------------------------------KLPFFIAGATKQ--TEPDIRIIHVTDNYLQHMVEMNMPRILRVKNGEVEP-DRCELCDCCRHNRVLKKP | |||||||||||||
3 | 4onbA | 0.16 | 0.07 | 2.43 | 1.74 | HHsearch-2 | EIFKLHRYD-FRRVSPSIINDFEYCPRLLWVQHK-LGL-KLLSEIIRGRILHERYERLLSQY------------E--------------NVVAEYKVEI------GDLVGVVDLVIKR------------------------------------------------GGEYIPVEIKTGFS--------KEAHKTQLQIYISMLKARFG-----------------------Y------L-V--------------------------------------------------------YR--------------NH---VEVVHRNDAA-LDVLKKIREILSARE-APP------AKCNSCIFKPICKNL | |||||||||||||
4 | 3h4rA | 0.11 | 0.06 | 2.24 | 1.05 | Neff-PPAS | -----------PGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLE-LEEFSNRAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDTGILCRCRPDKIIP--------------------------------------------------EFHWIMDVKTADIQRFKTAYYDYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTFMMGEEAKLAGQQEYHRNLRTLSDCLNTDEWPAIKTLSLPRWAKEYA----------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 4ic1A | 0.19 | 0.09 | 2.97 | 2.14 | HHsearch | FLLKEHHVKEENTIYVTDL---VRCPRRVRYESE-YKELVYAPSAILGDILHLGLESVLKGNFNA------------------------ETEVETLREINVGGKVYKIKGRADAIIRK------------------------------------------------S---IVIEIKTSRSDK--G-LPLIHHK-QLQIYLWLFSAEK--------------------------------G----------------------------------------------------------------ILVYITPD---RIAEYEINEDEATIVRLAEDTIL---Q-NSP---R--FNWECKYCIFSVICPA- | |||||||||||||
6 | 4ic1A | 0.20 | 0.09 | 3.04 | 1.71 | HHsearch-2 | KKLEEHVKE-ENTIYVTDL---VRCPRRVRYESE-YKELVYAPSAILGDILHLGLESVLKGNFN---------A---------------ETEVETLREINVGGKVYKIKGRADAIIRK------------------------------------------------S---IVIEIKTSRSDK--G-LPLIHHK-QLQIYLWLFSAEK--------------------------------G----------------------------------------------------------------ILVYITPD---RIAEYEINEDEATIVRLAEDTIL---Q-NSP---R--FNWECKYCIFSVICPAK | |||||||||||||
7 | 4onbA | 0.16 | 0.07 | 2.43 | 2.14 | HHsearch | KLLYAHRYD-FRRVSPSIINDFEYCPRLLWVQHK-LGL-KLLSEIIRGRILHERYERLLSQY------------E--------------NVVAEYKVEI------GDLVGVVDLVIKR------------------------------------------------GGEYIPVEIKTGFS--------KEAHKTQLQIYISMLKARFG-----------------------Y------L-----------------------------------------------------V----Y--------------RNH---VEVVHRNDAA-LDVLKKIREILSARE-APP------AKCNSCIFKPICKN- | |||||||||||||
8 | 3u44B | 0.13 | 0.10 | 3.40 | 1.58 | HHsearch-2 | ERRQLYGE--RIQGSVSRMETFNACPFSHFASHG-LHLKEQFEAPDIGQLFHSSLKLISDRLLDWRDLTKENYVKEKLQKIVTRVSGHAKASIGLELGFGGQLNTMELVGRIDRVDKAES--------------------------------------------SKGLLLRIVAYKSSDKGL--DLEVYYGLALQMLTYLDLSITHSADWAPAGVLIHDPMIQSNLPLGLDEIEQEIFKKFKM---------------KGLL------------LGDQ-EVV----RLMDTTLQ---EGRSNIINAGL--KKDGSLRS-DSAAVGEKEFDLLTKHVEQITDGRVSIEPYKMKNKTPCTYCAFKSVCQFD | |||||||||||||
9 | 3u44A2 | 0.20 | 0.09 | 2.94 | 1.66 | HHsearch | YPHQEVTQI-RTKQSVSDEY-------S--GRYRRPAFMKGLTAAEKGTAMHTVMQHIPLSHVPAELLTEEQ-KDAIDIEEIVQFFQLIGKWKDREIPFSLALEPLLVQGIIDCLYETE------------------------------------------------DGLYLLAYKSDRIEGGFEPILKKRYETQIQLYTKAVEQIAKTKVKGC-A--LYFFDGGHILT------------------------------------------------L------------------------------------------------------------------------------------------- | |||||||||||||
10 | 3l0aA | 0.18 | 0.10 | 3.27 | 1.58 | HHsearch-2 | LTSENYYSQENKEYSVSGYKDFAPCEFYG-EKLNGRWEDEKSTALLVGSYVDSYFEGSLDQFKKDEGELKANF--KQAEEIIARIERDEYFSGQKQVI-TGELFGAKWKIK-DSYIPG---------------------------------------------------VAIVDLKV-ASIT-DLFVRYWGYDIQGAVYQEIVRQNTGE--------------KL-----------------------------------------------------------------------------PFFIAGAT--KQTEPDIRIIHVTDNYLQEALPRILRVKNGEVEP--------DRCELCDC---CRHN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |