Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SSKPRSPTPTDRLAAQIGKTRLFLHGHVAAAENKVNEFMDSVLNLEESFTSTIASLAPPPQSGEKLMPGSLYVLVAAMTGSIVSRNRNILLRATVPVAVGIGAGWVVLPVTMRNVSDLLWKYEQRFPAI |
1 | 1ls4A | 0.12 | 0.12 | 4.34 | 0.86 | SPARKS-K | | LGLPTPDEALNLLTEQANAFKTKIAEVTTSLKQEAGSVAEQLNAFARNLNNSIHDAATSLNLQDQLSLQSALTNVGHQWQDIATKTQASAQEAWAPVQSALQEAAEKTKEAAANLQNSIQSAVQK-PAN |
2 | 1oyjA2 | 0.10 | 0.10 | 3.68 | 0.89 | FFAS-3D | | NSGADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREGGGRL--GFVDVALVPFTAWFYERCGGFSVEEVAPRLAAWARRCGRIDSVPEKVYDFVGVLKKKY--- |
3 | 2w6dA2 | 0.15 | 0.14 | 4.71 | 0.32 | HHpred | | -----QKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITELTGKD--VEDNSPGWAKWSKGNLAGFALAGAGNILLNYFTVIGIGGIIGILLGPIGFALLVKTAKELVKHLPQ- |
4 | 1st6A | 0.10 | 0.10 | 3.71 | 0.66 | MUSTER | | ARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSE-GEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSRALAKQIATSLQNLQSKTNRA |
5 | 4f4cA | 0.12 | 0.10 | 3.57 | 0.60 | CNFpred | | -----------VVEETISSIRTVLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQ--------ASNFISFALAFYIGVGWVH-NFGDMLTTFSSVMMGSMALGLAGPQVLGTAQGAASGIYEVLDRK |
6 | 2pffB | 0.13 | 0.13 | 4.56 | 0.44 | HHsearch-2 | | GGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGILEWLENNTPDKDYLLSIIYVVTAKFTPGELRSATGHSQGLVTVLFFIGVRCYEAYPNTSLPPSILEDSLENNVPML |
7 | 5h6iA1 | 0.08 | 0.08 | 3.07 | 0.83 | Neff-PPAS | | ---VNSNNQAQQMAQKLDQDSIQLRNIKDNVQGDYEKPVNEAITSVEKLKTSLRANSETVYDLNSIGSRVEALTDVIEAITFSTQHANKVSQANIDMGFGITKLVIRIVDSIKAQVNDVKALEQKVLTY |
8 | 2r6gF2 | 0.15 | 0.10 | 3.40 | 0.54 | HHsearch | | ----------------------------DALKW-------SVLGLLGLLVGYLVVMYA----QGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVL-FPLVCTAIANAQEVLLDRWQA- |
9 | 5wddA | 0.12 | 0.12 | 4.08 | 0.71 | SP3 | | -----SPTDKELVSQAKALCRDYINSRLIRAGVSWSGKLAEVSAILLRLGDELEYIRPNVYRNSLHSETVVTDAFLAVAAQIFTAGIT-WGKVVSLYAVAAGLAVDCVPAMVHTIVDCLGEFVRK--TL |
10 | 3mvpA | 0.05 | 0.05 | 2.47 | 0.60 | PROSPECTOR2 | | KNIRKPKQERSILKRYNDFFLTTIFADIDSLDRFKKNPKEWLNVLINQLKIFHAQIELAYAIPQALLEEHNNNLKNLTYKCLLYYSDQTLSLVVFDFISALVDELLYHEHTQEEAHQIKKTGIDSLSYL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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