Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FIQIHGRPCKIHLDPSVALAADSPSTMMSWQGDRDIMIDRFDVRAHLDFIPEVKHTEVELTEEESQEERFQNYERYRILVQNDFLGIPEDKFFAQLALEEQYGPVTKNEISVEGKKKSQLNAAIGFK |
1 | 5yfpH1 | 0.11 | 0.08 | 2.87 | 0.83 | SPARKS-K | | ------------NSTSLRKMLANPH------FNAK------------DFVHDKLGNASDLSIQVQEEVKLNINKSYNEIMTVNNDAMLELKRVRANINDLNEVLDQCTKIAEKRLQLQDQIDQER-- |
2 | 3j9aA | 0.11 | 0.05 | 1.70 | 0.51 | FFAS-3D | | ----------------------------------------------MNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQK--------------------------- |
3 | 1u1iA | 0.08 | 0.05 | 1.85 | 0.30 | HHpred | | ---MLGYSSITE------------IQYFPSLVDNKTAFDFVHFKGFLGKLMKFYFIWD-AIDAIVAAPLILDIARFLLFAKKKGKGVVK-------------------------------------- |
4 | 4j29A | 0.12 | 0.11 | 3.90 | 0.84 | MUSTER | | VVIVVSRDERI-LEELLEVVLKSDPNVKTVRTDDK------KVKEEIEKARKQGRPIV-RGATEEVVRDIVEYAQKEGL-RVLVIVDQDQEELERIYEQLK-VDVRVTDNEDEAKKRLKELLEKVLE |
5 | 5dcaA | 0.09 | 0.06 | 2.10 | 0.47 | CNFpred | | ---------------SALCILKEQ-ELVLYDAE-NDVIEATDLGNIASSF-------------------YINHASMDVYNRELDEHTTQIDLFRIFSMSEEFKYVSVRYEEKRE------------- |
6 | 1vt4I3 | 0.16 | 0.13 | 4.46 | 0.62 | HHsearch-2 | | -------EYALHR------SIVD-HYNIPKTFDSDDLIPPYDMTLRMVFLDQKIRHDSNGSINQQLKFYKDNDPKYERLVNAIL------DFLPKIEENLICSKYTDLLIFEEAHKQVQRGGGGGGG |
7 | 5u0pI | 0.10 | 0.06 | 2.06 | 0.79 | Neff-PPAS | | ------------------------------------------LRQGIRQLKEKVSKMEPEEMTVKEKKSIIEILKARIALKKAFLKMALSESNDTVVKKEDVRESPVDTFMENAT------------ |
8 | 3cinA2 | 0.14 | 0.06 | 2.17 | 0.51 | HHsearch | | NRYIGGNKSKFTKSSIVKDILIKPTGYLEPLGDKKFIAIHIEYVSFNGATDELMINGRI-------------------------------------------------------------------- |
9 | 2lndA | 0.07 | 0.06 | 2.33 | 0.82 | SP3 | | VLLVISTDTNIISSVQERAKHNYPGRYIRTATSSQ------DIRDIIKSMKDNGKPLFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKTAGSLEHHHHHH-------------- |
10 | 1w9rA | 0.10 | 0.09 | 3.18 | 0.49 | PROSPECTOR2 | | ---------GSHMPEKKVAEAE-----------KKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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