Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | VFWTWMYSTYFMEKWAPRQDDMLFYVRRKPAYMGTDGTEGRKQVEVEVYRKDSKKLPGLGDPDIDWEESVYLNLILQKLDYMVTCAVCTRSDAGDIHIHKKKSQQVFASPSKHPMDSKGEESKISYPNIFFMIDNFEEVFSDMTVGEGEMVCVELVARDKTNTFQGVIFQGSIRYEALKKVYDNRVSVAAKMAQKMSFGFYKYNNMEFVRMKGPQGKGHAEMAVSRV |
1 | 4gkpA | 0.07 | 0.06 | 2.40 | 0.62 | SPARKS-K | | --------------------RLFANIIEDEISIVNYSDEMKNHKTYKLIQNFS----HQNKDLFKEDLHVYIDFCLKRENFNLFSVGSSNIKNNYFDKFVITLQYVMLS-SQDLLSNKLKIEEST-----ISLGSLDEITDKLKKYSNGIGLSKFQFFCLQDPIPIDFYFIEIYQPSIYPILKRSSPLEIVLKKIFHDTK----SAFVFQIDHSAEVYDILKLSSHL |
2 | 1xi0A | 0.13 | 0.07 | 2.46 | 0.52 | FFAS-3D | | ------------------------------------------------------------------------------MSYSITLRVYQTNR--DRGYFSIVEKTVWHFANGGTWSEANGAHTLTQGGLRFLSTK------------GERITVAVGVHNY------KRWCDVVTLVINPQYYNNGGRDYVREKQLAEYSVSAIGTKVEVVYTVAEGNNEANVIFS-- |
3 | 4bptA2 | 0.13 | 0.04 | 1.52 | 0.31 | HHpred | | ---------------------------------------------------------------------QDWPLLQRMFWFTVEFGLIKTPK--GLRILSSISETVYCIPVRILFDPVMPYRIDQLQPVYFVIDSYQNLYDFVLSDM-------------------------------------------------------------------------------- |
4 | 3bk5A | 0.13 | 0.11 | 3.96 | 0.61 | MUSTER | | --------------NAEKGLEIA--RKARDEGWGD-KNAQESSTRLRLKSLEVEGDGDK----------GLTIFD-RDVTGTAFLNHSHTIGADDQWLYLPALKRVKRISSRNKSGPFG--SEFAYEDLSFEIEKYRNHLKDEKFNGQDVFVLEQIPTDKNSGYKQVVWLDKAHYRPLKEFYDRKGAL-LKTLTFANYKQYLDKYWRAHTATNHQTGKSTELNTSDL |
5 | 4z0vA | 0.08 | 0.06 | 2.26 | 0.89 | CNFpred | | DYRQNLIQKELTGY----NADVICLQEVDRA---------------------------------VFSDSLVPALEAFGLEGVFGLATFYRK--SKFSLLSQHDISFYEALE----------SDPLHKELLEKLVLYPSAQEKVLQRSSVLQVSVLQSTKD-SSKRICVANTHLYWHKGGYIRLIQMAVALAHIRHVSCDLY--PGIPVIFCGD-------------- |
6 | 2hw0A | 0.19 | 0.09 | 2.84 | 0.38 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------PSKKNGR----SGPQPHKRWVFTLNNPSEDERDLPISLFDYFIVEGNEEGRTPHLQGANFVKKQTFNKVKWYLGARCHIEAKDQQNKEYCSKEGNLLECGAPRSQGQR---------- |
7 | 4z48A | 0.10 | 0.09 | 3.42 | 0.77 | Neff-PPAS | | ---PVKAGYDLAVRDQVDTSQDSYSEAVSINRGGKVLT-----RSFKTYSKHFGK------DGKDEYSLIVFDRPADVNGTKYLVWSYRGLEQDDDWVYLPAESLVRRISGSSKFASFR----SDLSNEDIQNLDDVDEYDYLLQGEEDCYILERTPKKGKETQRQVQWVRKDTLLRLRADYYDKKDRLVKKLFFSRQEKIDGIWTVTQRVERPREGSFTVIDWSNL |
8 | 4g6xA2 | 0.10 | 0.02 | 0.81 | 0.32 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------PAASFAVDDIAAEYERLSALGVRFTQ-EPTD--G-P-VV------------------------------------------TAILDDTCGNLI-QLQI--- |
9 | 4wy9A | 0.10 | 0.09 | 3.39 | 0.53 | SP3 | | DNITNIITNTFDNSAYSN---FTYLYLIDPPEYFKEESKTQSGKFVMLYADEEGIKAIQASDEIA-NLQVVQDILKKAKYGVYIGRPIKMNLEGQDFDAVNVAIPIF--------DRKNQVVGVIG--MTLDFSDIATYLLDPKGQKYDGELRVLLNSDG------FMAIHPNKNLVLKNLKDINPNKGAQETYKA----ISEGKNGVFNYIASDGD-DSYAAINSF |
10 | 2vxrA2 | 0.11 | 0.09 | 3.34 | 0.73 | PROSPECTOR2 | | LFWGNPLRQYYLFNQGMQNASMGETAPRTNFNNAAINYQNLYLGLRFIIKKASNSRNINNDNIVREGDYIYLNIDNISDESYRVYVL---VNSKEIQTQLFLAPINDDPTFYDVLQIKKYYEKTTYNCQILC-----------EKDTKTFGLFGIGKFVKDYWDTYDNYFCISQWYL-------------RRISENINKLRLGCNWQFI----PVDEGWTE-----L |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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