Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | KSKKSKFSSMFKRDKKDKDSDKTQETLDDDKSQETLDDDKSQETLDDDKS |
1 | 1oksA | 0.18 | 0.18 | 5.84 | 1.22 | SPARKS-K | | -ASRSVIRSIIKSSRLEEDRKRYLTLLDDIKGANDLAKHQLVKIIKHHHH |
2 | 4yv4A | 0.13 | 0.12 | 4.18 | 1.48 | Neff-PPAS | | --AAENWRDAMKTELQTIRTEIQEETARRQEELNAQNLVKMQELMSNFF- |
3 | 6aciA2 | 0.09 | 0.08 | 3.10 | 1.07 | SPARKS-K | | ---DKKYLENIHKQESYPASERDNYLLGLREELKNIPEGKDSLIESYAEK |
4 | 2kncA | 0.24 | 0.08 | 2.50 | 0.22 | FFAS-3D | | --------GFFKRNRPPLEEDDEEG------------------------- |
5 | 3r5aA | 0.21 | 0.06 | 1.90 | 0.24 | HHpred | | --SVDKFPKMTDYVVP---------------------------------- |
6 | 1m1jE | 0.17 | 0.16 | 5.28 | 0.87 | MUSTER | | KTVKPVLRDL--KDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDII |
7 | 1cc0E | 0.32 | 0.14 | 4.22 | 0.77 | CNFpred | | ----------------------------QKSIQEIQELDKDDESLRKYKE |
8 | 1vt4I | 0.16 | 0.16 | 5.30 | 0.55 | HHsearch-2 | | IKTEQRQPSMMTRMYIEQRDNDNQVFAKYNVSRL-QPYLKLQALLELRPA |
9 | 1hbwA | 0.14 | 0.14 | 4.76 | 1.38 | Neff-PPAS | | ESRLERLEQLFLLIFPREDLDMILKMDSLRDIEALLTGLFVQDNVNKDA- |
10 | 3r5aA | 0.17 | 0.16 | 5.26 | 0.56 | HHsearch | | VFSVDKFPKMTDYVVPAGIADTARVRLNFNAG--TEGPNALVKVLADRN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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