Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VEIGGKCWFKENLRTTSYNSGTPILYTPDEAEWNXXGDXGGYSVYXXDNANTSIYGLLYNGYASVSPEGICPTYYNVPTLEEWDALIAELGGEEVAGGAMKESGLDHWASPNTGATNSSGFTALPGGGRSVGSAGYVGQTLSAEFWAQGTYIAPIDHVEDYIQAITISNTSASIADISHSSVRGHSIRCLR |
1 | 1yu2A3 | 0.12 | 0.10 | 3.25 | 1.04 | SPARKS-K | | TLVAGAFWADI---YLLGVNHLTDGTSKYNVTIADGSASPKKSTKFGSAAYSDGAWYNFAEH------GKRLPNYNEFQALAFGTTEATSSGGTDVPTTGVNGTGATSAWTSKWGVVQA-SG--------------CLWTWGNEFGGVNGAYAQPAAALFGGSWHYAYWYSGPSNSPANIGARGVC----- |
2 | 5n40A3 | 0.12 | 0.07 | 2.43 | 1.57 | HHsearch-2 | | LTASGVTFKRPYLAAEKPGTI--------------------GT-NV---ENNETWA-MFNQSQAV---AMC----TVPSSSQLVSLYNLYPLN-----QIQT---------------VAGW----------PT--------MQVYRSSTSAVIG------QHFYVYM--NTGNYAYNSIGNDGNYNVSCSL |
3 | 4epsA2 | 0.11 | 0.08 | 3.01 | 1.07 | Neff-PPAS | | --------SLYTETGKFSPALTQSIHDWFTTSFTSSYVSVTGYYDENNKNKPLRFLGYNNSEVLDLYYDTFKTGWYVPSSGELVALQDKNSLESKLNTKLIKVSDKTDIS--------------------------------ATYWSSTERNNK--------NYIVTYSKTAGSAGTGGVKTNTYTYRFFL |
4 | 5n40A3 | 0.12 | 0.07 | 2.42 | 1.16 | HHsearch | | LTASGVTFKRPYLAAEKPGTI--------------------GT-N---VENNETWA-MFNQSQAV---AMC----TVPSSSQLVSLYNLYPLN-----QIQT---------------VAGW----------PT--------MQVYRSSTSAVIG------QHFYVYM--NTGNYAYNSIGNDGNYNVSCS- |
5 | 5n40A3 | 0.15 | 0.09 | 3.02 | 1.01 | SP3 | | ---------AE----TLTASGVTFKRPYLAAEKPGTIGT--------NVENNETWAMF-NQSQAVAM---C----TVPSSSQLVSLYNLYPLNQIQTVA-------GWPTMQV-------------------------------YRSSTSAVIG------QHFYVYMNTGNAYNSIGNGDVDGNYNVSCSL |
6 | 4epsA2 | 0.11 | 0.09 | 3.18 | 1.12 | HHsearch-2 | | SLY-TKFSPALTQSIHDWTSFSSYVS-VTGYYDANENKPLRFLGYNNSEVLDLYKTDFECFQYQDDPSPSITTGWYVPSSGELVALQDKDNSLESKNTKLIK----------------------VSDK------TD----ISATYWSSTERNNK------NYVTYSK--TA-GSAGTGGVKTNTYTYRFFL |
7 | 4epsA2 | 0.14 | 0.10 | 3.60 | 1.11 | HHsearch | | CWVGNPPYTADALLRSNCVHGLVSLY-TETKFSPALTQPLRFLGYNNSEVLDLYKTDFECFQYQDDPSPSITTGWYVPSSGELVALQDKDNSLESKNTKLIK----------------------VSDK------TD----ISATYWSSTERNNK------NYVTYSK--TA-GSAGTGGVKTNTYTYRFF- |
8 | 4epsA2 | 0.07 | 0.06 | 2.43 | 0.97 | SPARKS-K | | GTPYTATNDALLRSHPNCVHGLVSLYTETGKFSPAQSIHDWFTTSFTSSYVSVTGYYDANENNKNKPLRF---LGYNNSEVLDLYYDTFECFQYQDDCESSFPSPSITTG------WYVPSVALQDKDNSLEKTDISATYWSSTERNNKN---------YIVTYSKTAGSAGTGVKTNTYTYRFFL----- |
9 | 1yu2A3 | 0.12 | 0.11 | 3.59 | 0.59 | FFAS-3D | | TLVAGAFWA---DIYLLGVNHLTDGTSKYNVTIADGSASPKKSTKFGGDGSAAYSD--GAWYNFAE--VMTHHGKRLPNYNEFQALAF------------GTTEATSSGGTDVPTTGVNGTGATSAWNIFTSKWGVVQASGCLWTWGNEANTGGRGSVYAQPAAALFGSRAAYWYSGPSNSPANIGARGVC |
10 | 5n40A3 | 0.12 | 0.07 | 2.43 | 0.66 | HHpred | | LTASGVTFKRPYLAAEKPGTI--G----------------------TNVENNETWAM-FNQSQAV---AMC----TVPSSSQLVSLYNLYPLN-----QIQT--VAGWPT---------------------M----------QVYRSSTSAVIG------QHFYVYM--NTGNYAYNSIGNGGNYNVSCSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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