>PF09546 (322 residues) FNVEKITKDLSAGKLEWNMDSLFKKVLGLLLKEIYLNAKIMLQLIVLAIICGILTNLQSS FGKEGVGEVAFFACYIFLVGVMIKSFTYAVNLGRDVIDNMVMFMQSMVPTLMTLLISTGN ITSASIFQPAILFSVQIIGTIIKNFLIPVLFFTTALSMVNNISDKFHVTKLIDFMKQLGK WCLGILLTGFIGVITVQGLASSVVDGVGSKTAKFAVGNFIPVVGGILSDAVDTVIGCSLI LKNAIGIAGLIIIVLICFIPVVKIMALITIYRLTGAIIEPVSDKRIVQCITDLGNSLTLI FAMVVSVAVMFLLSITIVIGAG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FNVEKITKDLSAGKLEWNMDSLFKKVLGLLLKEIYLNAKIMLQLIVLAIICGILTNLQSSFGKEGVGEVAFFACYIFLVGVMIKSFTYAVNLGRDVIDNMVMFMQSMVPTLMTLLISTGNITSASIFQPAILFSVQIIGTIIKNFLIPVLFFTTALSMVNNISDKFHVTKLIDFMKQLGKWCLGILLTGFIGVITVQGLASSVVDGVGSKTAKFAVGNFIPVVGGILSDAVDTVIGCSLILKNAIGIAGLIIIVLICFIPVVKIMALITIYRLTGAIIEPVSDKRIVQCITDLGNSLTLIFAMVVSVAVMFLLSITIVIGAG | |||||||||||||||||||
1 | 2x1gF | 0.08 | 0.08 | 3.14 | 1.10 | SPARKS-K | PLYAHLTRILVRKLAKWS-----SDDLECFRCYRQDISDTFMYCYILEILAAMLDEAIADLQRHPKLEACIYSFQSVQIPRLMRVLAELLGTALETMGSYCNWLMYIPPAINLLVRGLNSAQATLGLKELCRDLKPYADPLLNACHASLNLMFSIGKLMSLLRPEEYLDIIVSPCFEELQAICAARIRTIFRLNMISTLFSSLVMQRTMPIFKRIAEMW----VEE----IDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFCCAPTLEISKTAIVMFFKPLMQQLLREFIQHSFKLFSNISDTMETFFGCLTQIIKKI | |||||||||||||
2 | 6idpA | 0.10 | 0.10 | 3.57 | 1.56 | FFAS-3D | ---SSLAKQLFQ----MTWPMLFGVLSLMSFQLVDSPIQMVIIGIQVGLGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLETVFAIIDHYWLWWLAFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFAAIATIIAFGVGIAIVAPKVWQDLNISQSLTALGHIMGPAMLSQLLPPLSSMFATKLLAVAAWALGSRFEFFATMSLPPMIGRMLGTHIRQLVRIACQFVLGFQLLIALVTVSQILNLHLVIVPISLGALLMVSVANALGKSYVALTISALRGIEGLFIGALVGNIIAGWAAWLAYQKA- | |||||||||||||
3 | 5gpjA | 0.13 | 0.12 | 4.32 | 1.31 | CNFpred | FRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGI----YTKAADV-NPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLN-HELTAMLYPLIVSSVGILVCLLTTLF-IEPALKKQLVISTVLMT--GVAVVSFVAL-FLCVAVGLWAGLIIGFVTEYYTSYSPVQDVADSCNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMA-IRERTDALDAAGNTTAAIGFAIGSAALVSLALFGAFVSRA | |||||||||||||
4 | 3vvnA | 0.10 | 0.10 | 3.75 | 1.18 | PROSPECTOR2 | KTTKGV--QLLRGDP---KKAIVRLSIPMMIGMLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGADNVAVHSLILSLILGVTITFRSMGAEAVELAIEYARVLLAVGNGILRGEGDANRAMLAMVLGSGLNIVVGAAYATLLSMVVTSLFIAYWLFVKRDTYPSREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTWRITMLGIVPILGMAAATTSVTGAATAYLYAIKIAFMIELAVVALISALRTLPVFLFGMMTSAMFQGIGEGEKSLILTIFRTLRGVWIGIVIGNMVAAIVGFLWGLKKT | |||||||||||||
5 | 5u71A1 | 0.10 | 0.09 | 3.33 | 1.09 | SPARKS-K | MTTWNTYLRYITVHK--SLIFVLIWCLVIFLAEVAASLVVLWFYIYVGVADTLL-----AMGFFRG----------------LPLVHTLITVSKILHHKMLHSVLQ---APMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQPY--IFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTGRVGIILTLAMNI---MSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTE--- | |||||||||||||
6 | 3mktA | 0.11 | 0.11 | 3.89 | 1.53 | FFAS-3D | -RYKKEASNLIK----LATPVLIASVAQTGMGSIAASIWLPSILFGVGLLMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTAMATKTVGYMHAVVPAYLLFQALRSFIGFIGLLLNIPLNWIFVVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFEKELIRLFRLGFPVAAALFFEVTLFAVVALLVATVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLAANVGLMTGLATACITALLTQLLLFAAIYQCMDAVQVV--------AAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMT- | |||||||||||||
7 | 2e76A | 0.16 | 0.09 | 2.89 | 0.28 | HHpred | ------------------------------------IFYCLGGITLTCFLIQFATGFAMTFYYKPT-----------------------VTEAYASVQYIMN---E-VSF--GWLIRSIHRWSA-----------------------SMMVLMMILHVFRVYLTGFKKP-------RELTWISGVILAVITVSFGVTGYSLPWVGYWAVKIV-SGVPEAIPVVGVLISD---LLRGGSSVGQATLT---RYYSAHTFVLPWLIAVFMLLHFLMIR----------------------------------------------- | |||||||||||||
8 | 6idpA | 0.12 | 0.12 | 4.13 | 0.95 | MUSTER | MPIQMVIIGIQVG-----LGIATTAVISRAIGATEYAKQLGGLVIVIGGIGVALIALVLYL-PETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANG------NTLLPGTLMMVTSVLNLILDPIFIFTF-IDGAAIATIIAFGVGIAIVAPKVAQRTSYQWQDLNISQSLTALGHIMGPAMLSQLLPPLSSMFATKLLASFTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKE-ITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSE---TEVSQILNLHLVIVPISLGALGICMLMVSVANALG | |||||||||||||
9 | 3rkoB | 0.11 | 0.10 | 3.73 | 1.29 | CNFpred | VGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLALLLMYLGWEGVGLCSYLLIGFYYDPKNGAAAMKAFVVTGDVFLAFALFILYNELTLNFREMVMLMWATLMLLGGAVGKSAQLP-LQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFL---MTPEVLHLV-----GIVGAVTLLLAGFAALVQT--DIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACH-SIPLVYLCFLVGGAALSALTAGFFSKDEILAGAMAHINLMVAGLVGAFMTSLYTFRMIFIVFHGK | |||||||||||||
10 | 4a01A | 0.14 | 0.13 | 4.34 | 0.40 | HHsearch-2 | FQWLLVSKVKLAVDVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVFAILIFLFLGSVEGFSTKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLKGVGKAF--ITAFRSGAVMGFLLAANGLLVLYIAINLFKIYY-----------------G-D---DWGGLFEAITGYGLGGSSMALFGRV-GGGIYTKAADVGADLVG--KVERNIPEVGDIAGMGSDLFGSYAESSCAALVVASISSELTAMLYPLIVSSVGILVCLLTTLFATDFFEKEIEPAL---KKQ--LVISTVLMTIGVAVVSFVALVAVG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |