Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MAKPELGTKRLCPSCGAKYYDLNRNPITCPKCGTLFDIVSSSRAAKASRVVQQEDEDEDEEDLVAPELVSLEEADAEVEGDIVPDLGDDDEAAIDDDADDDVFIEDEE |
1 | 4k0mC | 0.14 | 0.14 | 4.73 | 1.33 | SPARKS-K | | IAKGEKIK--EAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
2 | 3zifN | 0.14 | 0.12 | 4.14 | 1.05 | MUSTER | | IYVPYV-TARL-PK-GSV--NMLGGVVLPP--NSQAHRTETVGTEATRDNLHAEGARRPEDQTPYMILVEDSLGGLKRRMDLLEESNQQLLATLNRLRTGLAA----- |
3 | 2pk7A | 0.14 | 0.06 | 2.22 | 1.32 | CNFpred | | ---------LACPICKGPLKLSAKTELISKGAGLAYPIRDGIPVMLE------------------SEARTLTTEERLD------------------------------ |
4 | 1w9rA | 0.17 | 0.17 | 5.49 | 1.45 | Neff-PPAS | | EKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP- |
5 | 6b8hd | 0.11 | 0.11 | 4.00 | 1.09 | SPARKS-K | | TATQLSSFKKRNDEARRQLLELQSQPTEVDFSHYRSVLKNTSVIDKIESYVKQYKPVKIDASKQLQVIESFEKHAMTNAKETESLVSKELDNIQSARPFDELTVDDLT |
6 | 3zf7n | 0.16 | 0.11 | 3.70 | 0.43 | FFAS-3D | | MGQRHGRTHILCRRCGRNAYHVQWE--RCAACA---------YPRAQRRRYNWSVKAIKRRRTGTGRCRYLKVVHRRIRNHFKTDIK--------------------- |
7 | 1rlyA | 0.14 | 0.06 | 2.21 | 0.49 | HHpred | | TSRLDALPRVTCPNHPDAVEDYRAGDMICPECGLVVGDRVDVGSWRTFSN---------------------------------------------------------- |
8 | 5dgesM | 0.14 | 0.12 | 4.14 | 1.00 | MUSTER | | IVKSN--KKADVPP--------SADPSKARKNRPRPSGGAIRDKTAGRRNNRSKDVTDSATTKKSAEKEAQADAAAEIAEDAAEAELNQQANNQFNKVPEAKKVEL-- |
9 | 3wwlA | 0.31 | 0.14 | 4.20 | 1.20 | CNFpred | | -------MVGTCPECGAELRLENPELVVCEDCGAELEVVG---------------------------PLRLEPAPEEAEDWGE------------------------- |
10 | 2f9iB1 | 0.26 | 0.08 | 2.56 | 0.74 | HHsearch-2 | | ----PAGIMTKCPKCKKIMYELAENLNVCFNCDHHIAL---------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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