Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | TKKRFIAGAVCPACSEMDKIQMWDEDGVPHRECVACGYADTLNAQGQSVPKELGTRVNQPKAKAADPKVQGVQFF |
1 | 2nvyI1 | 0.18 | 0.11 | 3.47 | 1.28 | SPARKS-K | | ----MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVY--------------------------- |
2 | 5k2mE | 0.19 | 0.13 | 4.29 | 1.18 | Neff-PPAS | | --------VECPVCGS--EIEIGEVELHQIVECPVCGAELEVVSLEPLTLEELPEVEEDWGE------------- |
3 | 6gykI1 | 0.19 | 0.11 | 3.45 | 1.23 | SPARKS-K | | -----TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVY--------------------------- |
4 | 2nvyI | 0.17 | 0.15 | 4.80 | 0.39 | FFAS-3D | | ----------CRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPRHELITNIGETAGVVQDIGSDPTLPRSD-- |
5 | 2g2kA | 0.23 | 0.19 | 5.85 | 0.44 | HHpred | | ----FIKFVLCPECENPETDLHVNKKQTIGNSCKACGYRGMLDTHHK-----LCTFILKNPPEN-SDSGTG---- |
6 | 6gykI | 0.18 | 0.16 | 5.23 | 0.97 | MUSTER | | TFR-------CRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPRHELITNIGETAGVVQDIGSDPTLPRSDRE |
7 | 2g2kA | 0.26 | 0.11 | 3.29 | 0.59 | CNFpred | | ---------LCPECENPETDLHVNPKQTIGNSCKACGYRG----------------------------------- |
8 | 2nvyI1 | 0.18 | 0.11 | 3.47 | 0.53 | HHsearch-2 | | ----MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLV------Y--------------------- |
9 | 2jrpA | 0.19 | 0.15 | 4.72 | 1.17 | Neff-PPAS | | -AKDFSLQALCPDCRQ--PLQVLKACGAVDYFCQNGH--------GLISKKRVNFVISDQLEHHHHHH------- |
10 | 2nvyI1 | 0.18 | 0.11 | 3.47 | 0.62 | HHsearch | | ----MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLV------Y--------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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