Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | IIDYLNKKAGSSYKPTDPATMRMIEARWTEGYRLEDFYQVIDNMTAKWGKNAQMMDFLRPATLFSDKFGNYL |
1 | 3solA | 0.10 | 0.10 | 3.62 | 0.80 | SPARKS-K | | ATRYLKMRCNRSDLPDEQSILNVANRIAIGKLTQEDIRKHSDDIYVRLTRDSTPEYIKCREFNRRLVPFIGE |
2 | 3h20A2 | 0.07 | 0.06 | 2.33 | 0.59 | FFAS-3D | | --SEMAGLVKRFGDDLSKCDFIAAQKLASRGRSAEEIGKAMAEASPALAERKHEADYIE-RTV--------- |
3 | 4pz6A | 0.09 | 0.06 | 2.10 | 0.21 | HHpred | | --------DDKRD-ANHISTVKSVLQSIEDGVSKEDLLKEMPIIREAYYNRK-------------------- |
4 | 6n1mA2 | 0.15 | 0.11 | 3.76 | 0.93 | MUSTER | | LVTALNQHIG-------DKAAKIAKTAHHDNISLQEAAVKLGI-----LTAEQFAEFVKPEKMISPE----- |
5 | 1af7A | 0.17 | 0.17 | 5.47 | 0.45 | CNFpred | | ICQLIYQRAGIVLADKRDMVYNRLVRRLRAL-GLDDFGRYLSMLEANQ-NSAEWQAFINALTTNLTAFFREA |
6 | 1vt4I3 | 0.14 | 0.14 | 4.74 | 0.67 | HHsearch-2 | | IVDHYNITFDSDDLILDQYFYSHIRMTLF-RMVFLDFRFLEQKIRHDSTAWNATLQQLKFYIEENLICSKYT |
7 | 4yxxA3 | 0.09 | 0.08 | 3.18 | 0.75 | Neff-PPAS | | EAVKRALKLKTKLGVSLEQALKILEVAAKLGTTVEEAVKRALKLKTKLGVSLEQALKILKVAAELGT----- |
8 | 5tmxA | 0.07 | 0.06 | 2.31 | 0.37 | HHsearch | | -GSHMASMKNAEHFELDQEWVELMVEAKEANISPEEIRKYLLLN--KKSAHPGRSHTVNPF----------- |
9 | 5ftwA1 | 0.13 | 0.10 | 3.39 | 0.79 | SP3 | | FTTKWKQLTGVDLTLYKAQMKRRLTSLYEKGFSFKDFAAALEKDQALL---NETLDRM-------------- |
10 | 1li5a1 | 0.11 | 0.11 | 4.00 | 0.42 | PROSPECTOR2 | | LYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNFDMAREVNRLKAEDMAAANAMASHLRKLSLLEQEPEAFL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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