Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | NHPFSINNLMSSSEQQQHKLDFKAYEQALQYSSYGAGLPGGLPLGSASMGGRGGIEPSALEPSYYQ |
1 | 3bogA | 0.12 | 0.12 | 4.27 | 1.13 | SPARKS-K | | HGVGCPGTAGAAGSVGGPGCDGGHGGNGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGA |
2 | 5w3nA | 0.28 | 0.23 | 6.95 | 1.03 | MUSTER | | -----------SYSGYSQSTDTSGYGQS-SYSSYGQSQNTGYGTQSTPQGYGSTGSSQSSQSSYGQ |
3 | 6nuwJ2 | 0.11 | 0.11 | 3.82 | 1.20 | Neff-PPAS | | ---LSLETLIDALYKINDLLQQRLQILDDAIQEKTSELAEFENMVRSPSAGDNAIPGLLQIIQSYI |
4 | 5yfpE1 | 0.06 | 0.06 | 2.61 | 1.06 | SPARKS-K | | ELDPKWKKLLKTDNFLG-GLTVNEFVQELS-KDHRNDVLIDANTKNLPTNEKDQDAIREAIWKQLD |
5 | 3ijmA | 0.18 | 0.08 | 2.47 | 0.33 | FFAS-3D | | SHPISLKTLV--QEDDIGVNAPIIHQSVIA------------------------------------ |
6 | 1qcnB1 | 0.20 | 0.15 | 4.83 | 0.28 | HHpred | | DSDFPIQNLFSTQSNKDQILDLSVIKHL----FTGPALSKVFDETTLNNF-GLG------------ |
7 | 2m7yA | 0.12 | 0.12 | 4.26 | 0.90 | MUSTER | | -GSTAMATTMEQEIAHSMTFEECPKCSALQYRNGFYLLKYDEEWYPEELLTDGEDDPDLDMEVVFE |
8 | 3j04A | 0.17 | 0.08 | 2.48 | 0.45 | CNFpred | | --PPGVLALLDEECWFPKATDTSFVEKLIQE----------------------------------- |
9 | 3kit4 | 0.14 | 0.09 | 3.11 | 0.47 | HHsearch-2 | | ---------MKE--------GIHPLVPARIICGCGNVIET----YST--KPEIYVEVCSKCHPFYT |
10 | 1xi4K | 0.11 | 0.11 | 3.85 | 1.20 | Neff-PPAS | | SEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELDEWYARQDEQLQKTKANNRVADEAFY- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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