Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | PTTSDLSVEQARGACQRAIADGKTRLQIELLLPLIGATDLDDWPGGIKQQFKAAVPLVYSLLRGLVGTSSAEASKKTLLDEADAVGVWESDSVALVLFPNAETVPDLERLAAVEGRPLLIMNPQWQAGQVISDFGFGARKQASEDFLATFEPAYQLQQKRIQGEDVRILRCYPGPYQVYLIDDRGKSDVVTSSETLPTYKEID |
1 | 1jdnA2 | 0.05 | 0.05 | 2.23 | 0.74 | SPARKS-K | | ------AYAKMGEMMLALFRHHWSRAALVYSD-----DKLERNCYFTLEGVHEVFQEEGHTSIYSFDETKDLDLEDIVRNIQASER-------VVIMCASSDTIRSIMLVAHRHGMTYAFFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLL--RGDFSVIAMTDVEAVIGDYFGKEGRFEMRPNVKYPWGPLKLR |
2 | 2ycbA3 | 0.11 | 0.10 | 3.52 | 0.72 | FFAS-3D | | P-SRNRAEKELVKTIYSTLRRGGK---ILIPVFAVG------RAQELMIVLEEYIRMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKV-----NGMDERREIVEGEPSIILSTSGMLT---------GGNSLEYFKWLCEDPDNSLVFVGYQAEGSLGR--RIQKGWKEIPLKDEDDKMRVYN---VRMNIKTIE |
3 | 4kzkA | 0.15 | 0.10 | 3.48 | 0.27 | HHpred | | -------------------------VKIGFVVKQPD----DPWFQDEWRFAEQAAKDKHFTLVKIAAP-SG---EKVS----TALDAAQKAQGVIICAPDVKLGPGIAAKAKRYGMKLMSVDDQLVDGRDVPHMGISAIRQVGDAIAARWEVGVLRLAYDQTGAAGNVVDAPEMTAD-------------------------- |
4 | 4wzzA1 | 0.11 | 0.09 | 3.24 | 0.67 | MUSTER | | --------------------YATTA-TYAIIVKSAG----NPYNQKESEGYKQVIEANGGKCVIQEPKSATAEDQITCINNAISQGV----DCIAIAANDTDALEPALTEAKNQGIHVLSLDSATNANSRKVFVNQAFLWNPIQLGNLA---AYASISLTITGAADQSFTVPDKTSYKITAAADGGTEIILGAPFKFEPSNIA |
5 | 5a8jA | 0.11 | 0.09 | 3.38 | 0.73 | CNFpred | | ------KINLALSSASRLVQDIIPGNFISIYLF-ELKSIKMGYTTNLHKAITKVLEKF-IPVKIILLSDGKPTDKRYSRD---YESLQVPKNVQLITIGLGENEAIMKILADKGSGVFYHIND---------------PSQLPTTLVEQKSVAAYNLTLNFSE-GLEVINYE-MPVNIPVVD--KDVNVYAVGNIPPGETDYT |
6 | 5vonA2 | 0.18 | 0.03 | 0.96 | 0.41 | HHsearch-2 | | AKTREEKVRVALRMYERLEHHGLRPEDLLFD-LL------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4wzzA1 | 0.10 | 0.08 | 3.12 | 0.69 | Neff-PPAS | | ---------------------YATTATYAIIVKSAGN----PYNQKESEGYKQVIEANGGKCVIQEPKSATAEDQITCINNAISQGV----DCIAIAANDTDALEPALTEAKNQGIHVLSLDSATNANSRKVFVNQAFLWNPIQLGNLAAYASISLVNGTITGAADQSFTVPDKTSYKITAAADGGTEIILGAPFKFEPSNIA |
8 | 1gcgA1 | 0.09 | 0.04 | 1.70 | 0.25 | HHsearch | | -----------------------ADTRIGVTIYKYD----DNFMSVVRKAIEKDGKSADVQLLMNDSQNDQSKQ-------NDQIDLAKGVKALAINLVDPAAAGVIEKA-RGQNVPVVFFNKEPSRK---ALDSY--------------DKAY------------------------------------------------- |
9 | 3c0sA | 0.13 | 0.10 | 3.42 | 0.74 | SP3 | | EERVREKAAENLRDLERILRFGFA--LFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALAR---------AFGQRLSHPGQYVNPGSPDPEVV-----ERSLAELRYSARLLSL----LGAEDGVLVLHLGGAYGEKGKALRRFVEN------LRGEEEVLR------------YLALENDERLW----------NVEEVL |
10 | 5x2mB2 | 0.10 | 0.07 | 2.74 | 0.73 | PROSPECTOR2 | | PSDIRQVDQQGVQQFSKKAEDMGVCVAYQGLIPIYDDP---------KPAIQTIINNIQTT----------------------------EVKVVVVFSLVSPAVSFFEEVIKKNLTGVWIASSSWAISDKVYSLPN----------IDSIGTVIGFID----EGYSVIQRIWENQSLSSVGSYRSANLSINETLFKNNSEKPE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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