Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LQRSKSTFQLTSEENSKEFHWKDGLQDILGTFQDTSFNRAYRDSIKDAQSKVLRSTSFRRKDLSVNSPHLNRHLSVEQVTSNKTSTKPGGVSPHTPRERHVVTPEEVPPALPSTPAVGPSFPRICGRKRLTAEQKKRSYSEPEKINELGVSDASQKKGPQTFLFPETSVADRRKMFEPEGK |
1 | 6emkG | 0.03 | 0.03 | 1.56 | 1.39 | SPARKS-K | | LHYASYHGRYLICVYLIQLGHDKHELIKTFKGNTCVHL------------------ALMKGHEQTLHLLLQQFPRFINHRGENGRAPIHIACMNDYYQCLSLLIGVGADLWVMDTNGDTPLHVCLEYGSISC---------------MKMLLNEGDNVRDKGNWKPIDVAQVGNIYSKVLK |
2 | 6etxG | 0.10 | 0.10 | 3.83 | 1.10 | MUSTER | | RVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGS |
3 | 2tmaA | 0.06 | 0.06 | 2.48 | 1.64 | Neff-PPAS | | -ALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQK-LEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVT-NNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE |
4 | 6em5m | 0.11 | 0.10 | 3.55 | 1.38 | SPARKS-K | | IQRNEQTDDSINPYEPLIDWFTRHEEVMPLTAVPEPVPSKNEAKRVMKIVRAIREGRIIPPKKLKEMKEKEKIENYDSTETNDHVMHLRAPKLPPPTNEESYNPPEEYLLSPEEKEAWENTE---------YSERERNF-IPQKY-----SALRKVPGYGESI---------RERFERSLD |
5 | 3j4bA | 0.07 | 0.07 | 2.69 | 0.46 | FFAS-3D | | LSAVNDILASIGEPPVSTLEGDANAD-----------AANARRILNKINRQIQSRGTFNIEEGITLLPDV--YSNLIVYSDDYLSLMSTSGQSIYVNRGGYVYDRTSQSDRFDSGITVNIIRLRDYDEKASRQFNNRFFGAPEVEGVL----QEEEDEARRLCMEYEMDYGGYNMLDGDA- |
6 | 5yx5A2 | 0.21 | 0.04 | 1.23 | 0.25 | HHpred | | -----------------------------EPLLDVAFNALFKNHVKELEAIVESDTSVVWAK----------------------------------------------------------------------------------------------------------------------- |
7 | 6gejM | 0.10 | 0.10 | 3.83 | 0.92 | MUSTER | | VNKLRETNKQLQEEFGEASFLNFQDANQYFKYSNKQKLEGTVDMLNFLKMVNKLRCDRRPIFGKNLIDLLTKDRRVKYDKSSIIDNELIKPLQTRVLDNAVLTPSAVSLDMRKLALGLNDDSSVGENTRLKVMQNCFEVSNPLHQLQTKLTIAFPDKSLLQYDCGQKLAILLQQLKDNGHR |
8 | 5c3pA | 0.18 | 0.05 | 1.62 | 0.41 | CNFpred | | ----KESYEIGREDEGHPNPWPAEQDDLVGFKS----MNNFFDQCKALHIEVMRAIAV--------------------------------------------------------------------------------------------------------------------------- |
9 | 2pffA1 | 0.14 | 0.13 | 4.51 | 0.57 | HHsearch-2 | | NQGSKQDVELIEAEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARG-IETRP----AQVILPMSPNHGTGMYSELFNRWHSESWANQL------TVCGAIGWTRG-TGLMSANNIIAIEKMGVRTFSQKEMAFNTPEVVELCQKSPVMAVPELKTAKELVETSEVRKAVSIETAL |
10 | 4ke2A | 0.07 | 0.07 | 2.94 | 1.51 | Neff-PPAS | | AAASKAAVTAADAAAAAATIAASAASVAAATAADAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALETINVKAAYAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAAAAIAFAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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