Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | PQSVDKLVKPFRCPGSATITRTSDKPTRKRRKVDYGGADGDKDDSDKPWTNEDRLALANRDANKFPIFQVKDKDTMFRKRFSVPLINKNAGGYNPSRPPPTLGLRQGAVFIAKALHDPSGEFAIVLYDPTVDEKPRTIQEARKDDEKKEEEPEKPKLDAPLAHKSLAEILGIK |
1 | 5jcss | 0.09 | 0.08 | 2.90 | 1.12 | SPARKS-K | | TNLIPKLIDSYKYMNTKFISLNKGAHTRVCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAG-AIGEFKALEPIIQAIGESLDIASSRISLFLT-----QHVPTLENL----------------DDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVC |
2 | 1z3iX | 0.31 | 0.13 | 3.84 | 1.56 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------LGLRRAG--VRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVQREGVKCIMADEMGLGKTLQCITLIW |
3 | 6ic4A | 0.06 | 0.06 | 2.45 | 1.33 | Neff-PPAS | | --VSGLVGTNLSDGYTMKAQFDNVNGLKPRAKVTMSGVTDSITLDPVTRLATVTFDLDGKLTSFNAEQLKEVQKNALDELRYSSDYTQATPAQQKTMEQQLISNMNSITSIDEDAYGLLGEKYLKIVPGGGLNYL----------------KRGDTISNTQGTMDLEDLIS-K |
4 | 1z3iX | 0.33 | 0.13 | 3.99 | 1.71 | HHsearch | | -----------------------------------------------------------------------------------------------------LGLRRAG--VRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHQREGVKFLADEMGLGKTLQCITLI- |
5 | 6e5oY | 0.13 | 0.13 | 4.43 | 1.07 | SPARKS-K | | AENRVVDISGFSIGSDGHSIQLENGKREKKGRIRFTDGTDIKKSGKWQFDPDDEQAFGTRQGREFIWNDLLSLETGLIKRVIEKTIYNKKIGRDEPALFVALTFERRENIKPVNLRGENIPAVIALTDPEGCPLRIGEGYKEKQRAIQAAKEVEQRRSRKFASKSARDLFYHA |
6 | 6em3B | 0.10 | 0.08 | 2.75 | 0.47 | FFAS-3D | | ----------FTRHEEVMPLTAVPEPKRR------------------FVPSKNEAKRVMKIVRAIREGRIIPPKKLKEMKEKEKIENYQYDLWGLRAPKLPP-----------PTNEES-------YNPPEEYLLSPEEKEA---WENTEYSERERNFIPQKYSALRKVPGYG |
7 | 1z3iX | 0.32 | 0.13 | 3.83 | 0.76 | HHpred | | -----------------------------------------------------------------------------------------------------LGLRRAG--VRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVQREGVKNIMADEMGLGKTLQCITLI- |
8 | 3ucpA5 | 0.12 | 0.11 | 3.91 | 0.74 | MUSTER | | VISEAK--------GEKADFSASHALTHAADKPDNSCGTSAVPNTAVALADGSCVANGAPAHSKKPFERGFDFKVMIHQIHADTRSVRRLTTDAATFPENPANDKGQLSLATLGNKPAFLASTGEY-SPTVATTATDSAVIGHFETNGGVYNAAAGTYTPGSHGEGKSF-PVK |
9 | 3egwB | 0.17 | 0.06 | 1.90 | 0.53 | CNFpred | | --------------------------------------------------------------------------------------------------------------LALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRI-----VQYLANLLTAG |
10 | 1z3iX1 | 0.31 | 0.13 | 3.84 | 1.15 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------LGLRRAG--VRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVQREGVKCIMADEMGLGKTLQCITLIW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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