Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | NDEVELSEDPEGEQKVDKNGRLLGGREYRVRTFTILGRGERLYMLSTEPARCIGFRDSYLFFQKHRNLYKIIIDDDEKRDLIERDLIPHSYKGRAIGVVTARSVFREFGAKIVIGGKKVIDDYETQKARERG |
1 | 5aj1A | 0.13 | 0.11 | 3.65 | 1.25 | SPARKS-K | | ---------------GSMMMALSKTFGQKPVKFQLEDDGEF-YMIGSEVGNYLRMFRGS-LYKRYPSLWRRLATVEERKKIVASSHGKKGYTTLAVTLLKASEVEEILDGNDEKYKAVSIS----------- |
2 | 5aj1A | 0.12 | 0.09 | 3.23 | 1.00 | MUSTER | | -----------GSMMMALS-KTFGQK----VKFQL-EDDGEFYMIGSEVGNYLRMFR-GSLYKRYPSLWRRLATVEERKKIVASSHGKKTKPATSVTLLKASEVEEIL-D-----GN---DEKYKAVSIS-- |
3 | 5aj1A | 0.12 | 0.09 | 3.24 | 1.59 | HHsearch | | GSMMMALS--------KTF----GQK---PVKFQLED-DGEFYMIGSEVGNYLRMFRG-SLYKRYPSLWRRLATVEERKKIVASSHGKHGTLATSVTLLKASEVEEILD------GN---DEKYKAVSIS-- |
4 | 1l8rA | 0.11 | 0.08 | 2.75 | 0.94 | SPARKS-K | | -----------------GSQNNECKVDLKVASFTVE--GCELICLPQAFDLFLKVGGLHTVYTKLLEITPVVCNVEQVRILRGLGAIQPGVNR--CKLISRKDFETLYNDCTNA------------------ |
5 | 5aj1A | 0.15 | 0.11 | 3.83 | 0.71 | FFAS-3D | | GSMMMALSKTFGQKPV---------------KFQLEDDGEF-YMIGSEVGNYLRMF-RGSLYKRYPSLWRRLATVEERKKIVASSHGKKTKPNTSVTLLKASEVEE-----ILDGN----DEKYKA------ |
6 | 5aj1A | 0.14 | 0.10 | 3.37 | 0.61 | HHpred | | ---------------------MALSKTFKPVKFQLEDD-GEFYMIGSEVGNYLRFRGS--LYKRYPSLWRRLATVEERKKIVASSHGGYTTLATSVTLLKASEVEEILD------GN---DEKYKAV----- |
7 | 3hd5A | 0.10 | 0.10 | 3.64 | 0.70 | MUSTER | | QQYVNINPDTPGKIEVAYT-DWAAPQDVVLKQVPIAFNAGKPLQQLYYTLQALEPDLHPKVFTAIHTERKRLFDKKAGEWAASQGVFDSVFDSFSVQVQRASQLAEAAHIAFAVGGRYT--SPVLAGNDYAG |
8 | 5aj1A | 0.11 | 0.06 | 2.21 | 0.76 | CNFpred | | -----------------------------PVKFQLE-DDGEFYMIGSEVGNYLRMF-RGSLYKRYPSLWRRLATVEERKKIVASSHGGYTTLATSVTLLKASEVEEI------------------------- |
9 | 5aj1A | 0.12 | 0.09 | 3.24 | 0.89 | HHsearch-2 | | GSMMMALSKTFGQK---------------PVKFQLED-DGEFYMIGSEVGNYLRMFRG-SLYKRYPSLWRRLATVEERKKIVASSHGKHGTLATSVTLLKASEVEEILD------G---NDEKYKAVSIS-- |
10 | 5aj1A | 0.11 | 0.08 | 2.76 | 0.97 | Neff-PPAS | | -------------------------KTFKPVKFQLEDDG-EFYMIGSEVGNYLRMFRG-SLYKRYPSLWRRLATVEERKKIVASSHGKKTKPNTSVTLLKASEVEEILDGN---------DEKYKAVSIS-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|