Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | DYYDILAGLSAFERSHEVSFTLEELKELVKPKKDDEKKKLQEGSKKSSKRITVHGYLGGKVDLTEASNANYDLSHTLLGGYVPKKQLESLSSIDFA |
1 | 2f2pA1 | 0.11 | 0.09 | 3.38 | 0.71 | SPARKS-K | | --EEIREAFRVFDKDGNGYISAAELRHVMTNTDEEVDEMIREADIDGD----------GQVNYEEFVQMMTAAAA---RKEVIRNKIRAIGKMARV |
2 | 5zibA3 | 0.16 | 0.15 | 4.85 | 0.43 | FFAS-3D | | ---DFNILYSMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKVLVHLGLLVQWSDLITSLYLLGHDIR-ISASLAELKEIMK---- |
3 | 2pffB | 0.19 | 0.19 | 6.03 | 0.47 | HHpred | | LEGNDIHALAAQENDTTLVKTKELIKNYITARIMAKRPFDRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVG-DLIKFSAETLSELI-- |
4 | 1aj5A2 | 0.15 | 0.14 | 4.58 | 0.69 | MUSTER | | -WQGIYKRFDT-DRSG--TIGSNELPGAFEAANQHIYSMIIRRYSDETGNMDFDNFISCLVRLDAMFRASLDKNGT---GQIQVNIQEWLQLTMYS |
5 | 1it6A | 0.17 | 0.17 | 5.46 | 0.63 | CNFpred | | NIDSIIQRLLEVR-GKNVQLQENEIRGLCLKSREIFLSQPILLEL---APLKICGDIHGQYDLLRLFEYGGFSNYLFLGDYVDKQSLETICLLLAY |
6 | 2pffB | 0.19 | 0.19 | 6.05 | 0.70 | HHsearch-2 | | LEGNDIHALAAQENDTTLVKTKELIKNYITARIMAKRPFDKKVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVG-DLIKFSAETLSELIRT |
7 | 1pp1X2 | 0.15 | 0.15 | 4.93 | 0.71 | Neff-PPAS | | -YTTIKEYLAECDATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKTIQPGASVKETQLARYRRREIS |
8 | 2ex3B | 0.11 | 0.08 | 2.98 | 0.74 | HHsearch | | GGGGGGGRYQFEKNAYGVVASKAKIAEIERNTKEVQRLVDKIKAMKDKEYYA-------------------------TGINRPHSRLRTLTDPQY- |
9 | 5i2lA | 0.17 | 0.16 | 5.11 | 0.65 | SP3 | | QIKDMEKMFKQYDAGRDGFIDLMELKLMMEQTHLGLKNMIKEVDEDFD----------SKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVS |
10 | 5fvcA1 | 0.16 | 0.16 | 5.22 | 0.42 | PROSPECTOR2 | | GQTMLRWGVIARSSNNIMLGHVQAELKQVTEVYDLVREMGPESGLLHLRQSPKAGLLSLANCPNFASVVLGNAIIGMYRGRVPNTELFSASLKESN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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