Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KVKSSVPGGEVLKGLGYTKAQPQILAKEDHEYPEWLWTLLDDSKMATGDTKVDLSAMTKKQRARYERQQEKLLKDLPVNIPPHEQSKDLTGPGDDAVTSLQRRHEITKSARAARRKSIRESNFLK |
1 | 5nrlN | 0.12 | 0.08 | 2.83 | 0.96 | SPARKS-K | | -------------------------------------PRPLFMKKKANDDARVLQTKKENMIKNIDKANQVAKNYENE----ELIKQCLLDSEKERQKWFERQNERKQKHRRIQLAKQRESEEYE |
2 | 6mzcE | 0.09 | 0.06 | 2.45 | 0.67 | FFAS-3D | | --------------------------------QAPLQRRILEIGKKHGITELHPVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQQIEKQRKDEQEREILMRAAK--- |
3 | 3majA1 | 0.19 | 0.05 | 1.55 | 0.28 | HHpred | | --------------IEGRRIGVELVAPGETGYPTRLATIDDAPPLL------------------------------------------------------------------------------- |
4 | 2pmsC | 0.12 | 0.10 | 3.67 | 0.85 | MUSTER | | -------------GSHMDAEEVAPQAKIAE---ENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAVNE- |
5 | 5dfzD | 0.17 | 0.11 | 3.69 | 0.47 | CNFpred | | --------------------------KERDTYAQFLSKLESQNKEISESNKEKQYSHNLSEKENLKKEEERLLDQL----------------LRLEMTDDDLDGELVRLQEKKVQLENEKLQKLS |
6 | 2pffB | 0.12 | 0.12 | 4.23 | 0.72 | HHsearch-2 | | LIRTTLDAEKFTQGLNILEWLENPSNTPDKDYQDYVNSHLPAGKQVEINGAKNLVSGPPQSLYGLNLTLRKASGLDQSRIPFSERKLKFSNRFL-PVASPFHSHLLVPASDLINKDLVKNNNAKD |
7 | 2pmsC | 0.10 | 0.08 | 3.00 | 0.87 | Neff-PPAS | | -------------------DAEEVAPQAKIAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAVNE- |
8 | 2m4hA | 0.21 | 0.11 | 3.56 | 0.62 | HHsearch | | --------GT-------YRGRG--VALTDDEYDEWREHNASRKL----DLSVEDFLMLR---HR---------AALG---ADDNDA-----------------VKFRSWW-NSRTKMA--NDY-- |
9 | 2pmsC | 0.09 | 0.07 | 2.78 | 0.68 | SP3 | | ------------------GSHMDAEEVAPQAKIAELENQVHRLEQELKEIDEAPLQSKKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAV--N |
10 | 1eq1a | 0.10 | 0.10 | 3.59 | 0.58 | PROSPECTOR2 | | DAPAGGNAFEEMEQFNSLVNSKNTQDFNKASVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPEANAFKDKASNMEETNKKLAPKIKQAYDDFVKHAEEVQKKLHEAATKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|