Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TFLYVMSLRTGASLITLSLLLNKISGLYGLLALLTGYHLSPVQLSMYLYSLVALGLAALLFPHIRKQTPLQCLALAWLYVFDSVINAAYTAAFGVTWFLVISQHYDSDAASGPGSETIEQTAGFTNPKYDTSDYSSNDHEARSALDDGLSNAVSQPESFQSIVCICLLWIVRAYFVFVMLAFARQALRRY |
1 | 6eyuA | 0.13 | 0.12 | 4.03 | 0.94 | SPARKS-K | | YIITAMISGLLFLYLPRKLIHFFIVVWSGLMYTNFLNQSFLSDYAWYMDWMVSTPLILLALGLTAFHGLGALLGAEFTLVITGLLAQAQVLLLLGVVYLLAKPFREIAEESSDGARAYKILAGYSGIDALPGSLNI------------------LDPTQTSIALVVLPFFCKQVYGFLDMYLIHKAELEH |
2 | 4hyjA | 0.14 | 0.09 | 3.07 | 0.97 | FFAS-3D | | --------RPLLTKLVIADVIMIVGGYIGESSINIAGGFTQLGLWSYLIGCFAWIYIIYLLKAAENKPAPIRDALLKMRLFILIGWAIYPIGYAVT----------------------------------------------------LFAPGVEIQLVRELIYNFADLTNKVGFGLIAFFAVKT----- |
3 | 5tj5A | 0.15 | 0.12 | 4.05 | 0.28 | HHpred | | -IGNFIP-----GLLLSVCIVYKWAVDWMLINMFPGTEQAKVQVFLLLMALVCIPWLLLVKPLHFKFDI---MIHQVIHTIEFCLNCVSTASYLRLWALSLAHAQLS--------SVLWT----------MT------------IQIAFGFR--GFVGVFMTVALFAMWFALTCAVLVLMAMLHSLRLHW |
4 | 3rceA | 0.12 | 0.12 | 4.27 | 0.89 | MUSTER | | TMSGYYDVLPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWWYPSSYSLNFAMIGLFGLYTLVFHRKEKIFYLAIALMIIALSMLAWQYKLALIVLLFAIFAFKEEKINFYWALIFISISILHLSGGAFMYFNVNETIMEVNTIDPEVFMQRISSSVLVFILSFIGFILLCKDSMLLALPMLALGFMALR |
5 | 4mt1A | 0.10 | 0.07 | 2.53 | 1.00 | CNFpred | | -----------IPLAVILVIPLGLIGAAAGVTGRNSFANDIYFQVGFVTVMGLSAKNAILIIEFAKKSAVEAALEAARLRFRPIIMTSFAFILGVVPLYIAAGA--------------------------------------------------SSASQRAIGTTVFWGMLVTLLSVFLVPLFYVVVRKF |
6 | 1vt4I3 | 0.18 | 0.12 | 3.78 | 0.96 | HHsearch-2 | | ----------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH--------IGHHLKNIEPERM-----------------TLFRMVFLDFRIRHDSTAWNASGSILNTLQQ------------------------LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIAL |
7 | 5do7A2 | 0.05 | 0.05 | 2.24 | 0.83 | Neff-PPAS | | --VLKGAIQDRVGLLYQFVGATPYTGMLNAVNLFPVLAYALHVLPFSVVATMIFSSVCYWTLGLHPE----VARFGYFSAALLAPHLIGEFLTLVLLGIVQNPNIVNSVVALLSIAGVLVGSGFLRNIQEFYGLNFTCAFTQGIQFIEKTCPGATSRFTMNFLILYSFIPALVILGIVVFKIRDHLIS-- |
8 | 5xtcr | 0.12 | 0.10 | 3.56 | 0.56 | HHsearch | | VKMPLYGAHIAGS-MVLAAVLLK-LGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSVILMIAHGLTS--SLLFCLANSNYERTHSRIMLSQGLQTLLLAANLAL--PPTINLL--------GEL---SVLVTTFSWSNITLLLT-GLNMLVTAL-------YSLYMFTT- |
9 | 3m1gA2 | 0.09 | 0.07 | 2.78 | 0.68 | SP3 | | VNNGVYRTGFAGSQEAHNEAYKRLWVALDWLEDRLGDHITEADIRLYPTLVRAVYHGHFKCGRNKITEPNLWGYLRDLFQTPGFGDTTDFTEIKQHYYITHAENPTRIVPVGPDLSGFATPHGGGSPFAEGVTLPGPIPAGEEVKNPEPFQ--------------------------------------- |
10 | 5ed7A | 0.10 | 0.09 | 3.55 | 0.73 | PROSPECTOR2 | | P--PGPTLRELWWVFYAADREVRAVRGFREQAWKLALGLSPLQKLAVYYYIIALVRLVGRYTQRHGLYVPRPDDPVLADAINGLFRDALAAGTTAEQLLMFDLLPPKDVPVGSDVQADSTALLRFIESQRLAVPGGVISPEHVAYLGAFLSVLYAGRGRMSAATHTGAASRTRAAGYLDVLLTVRLARSQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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