Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LAVGMLLTPVCVAAAYATLPREKLSTYRLRSEAREHMEDEKEATECLVVEEARQLKGKDGEDIITGSRLTRVVAKTGRPRRRPYAAKIAQVARAKVGYLKNTPENRLIYQRVLIEIMDKDCVRYCDRDGVLPLAIGCCFVYPEGTEEASQLWGS |
1 | 5cwfA | 0.19 | 0.18 | 5.88 | 0.74 | SPARKS-K | | KKVMEALKKAVELAKKDEVAREIERAAKEIVEALRENNSDEMAKVMLALAKAVLLAAKNNDD-----EVAREIARLRENNSDEMAKVMLALAKAVLLAAKNDDEVAREIARAAAEIVEALRENNSMAKKMLELAKRVLDAAKNNARQAAEEVEA |
2 | 5wa3A2 | 0.14 | 0.12 | 4.21 | 0.62 | FFAS-3D | | PTIAFDLVVATAHALSTGGLPVARTSLRSHAEAYLARRSLRELWRDHYARNREAFTE-------RLIAVASSAESAENGAHLPHVREWVRRLRPIRGELTDSPAYRLVINCTYL-HLTRLGLTPHQRFLVCHLA----------ADAAADVYGI |
3 | 2eyqA3 | 0.16 | 0.10 | 3.24 | 0.24 | HHpred | | --------PSLLPDDFIPDVNTRLSFYKRIASA------------------------KTENEL----------------------EEIKVELIDRFGLLPDPARTLLDIA-RLRQQAQKLGIRKLEGN---EKGGVIEFAEKNNPAWLIGLL-- |
4 | 5cwdA | 0.17 | 0.17 | 5.55 | 0.70 | MUSTER | | DARSTCEKAARKAAESNDEEVAKQAAKDCLEVAKQAGMPTKEAARSFCEAAARAAAESNDEEVIAAKACLEVAKQAGMPTKE--AARSFCEAAARAAAESNDEEVAKIAAKACLEVAKQAGMPTKEAARSFCEAAKRAAIAKKACKEVAKQAGM |
5 | 2iw3A | 0.06 | 0.05 | 2.23 | 0.60 | CNFpred | | KTAANAMQAVAHIANQSNLEPYIVQLVPAICTNAGNDKEIQSVASETLISIVNAVN-------------------------PVAIKALLPHLTNAIVET-NKWQEKIAILAAFSAMVDAAKQVALRMPELIPVLSETMWDKKEVKAAATAAMTK |
6 | 1vt4I3 | 0.19 | 0.14 | 4.41 | 0.93 | HHsearch-2 | | --------------EYA-LHRSIVDHYNIP-------------------------KTFDSDDLIPPYLDQHHLKNIEHRMVFLDFRFLEQKIRHDSNASPYICDNDPKYERLVNAILDFENLICSKYTDLLRIALMAEDE--AIFEEAHKQVQR |
7 | 5h7cA3 | 0.13 | 0.12 | 4.31 | 0.76 | Neff-PPAS | | -LVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTD---SELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQKDDPSQSANLLAE |
8 | 1vt4I3 | 0.18 | 0.13 | 4.23 | 0.84 | HHsearch | | --------------EY-ALHRSIVDHYNIP-------------------------KTFDSDDLIPPYLIGHHLKNIEHRMVFLDFRFLEQKIRHDSNASGYICDNDPKYERLVNAILDFENLICSKYTDLLRIALMAEDE--AIFEEAHKQVQ- |
9 | 1oj7A | 0.14 | 0.14 | 4.68 | 0.68 | SP3 | | VANGVVDAFVHTVEQYVTKPVDAKIHDRFAEGILLTLPENYDVRANVMWAATQALNGLIGAGVPQDWGLDHVLPALWNEKRDTKRAKLLQYAERVWNITEGSDERIDAAIAATRNFFEQLGVHLSDYGLSIPALLKKLEEHGMTLDVSRRIYEA |
10 | 2r18A | 0.06 | 0.05 | 2.24 | 0.60 | PROSPECTOR2 | | TPEEAQREKDTRISKKMETMGIYFATPEWVALNGHRGPSPGQLKY----WQNTREIPDPNEDYLDYVH--------AEKSRLASEEQILRAATSIYGAPGQAEPPQAFIDE-VAKVYEINHGRGPNQEQM------------KDLLLTAMEMKH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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