Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | VQLNNNGYEGIIFAIDPRVPEDGKIIEQIKDMVTTASTYLFEATEKSFFFKNVLILIPNNWKENSQYKRPKHGSYKHADVLIAPPTLPGRDEPYTRQFIVCEEKGEYIHFTPDFVLGKKQKEYGPSDRLFVHEWAHLHWGVFDEYNEDEPFYSAKSKRVEATRCSTGITGINRVYKCQGNSCIIRGCRIDSQTKLYEKDRQFFPDKDQTGKASIMFMQGINSVVEFCNKENHNREAPSLQNKMCNSRSTWEVISNSEDFKNTTSL |
1 | 1buvM | 0.12 | 0.08 | 2.66 | 0.71 | SPARKS-K | | IQGLKWQHNEITFCIQNYTPKVGE--YATYEAIRKAFRVWESATP-------------LRFREVPYAYIREGHEKQDIMIFFAEGFHGDSTPFFLAHAYFPGPIGGDTHFDSAWTVRNEDLNGNDIFLVAVHELGHA-LGLEHSSDPSAIMAPYQWMDTENFVLPDDDRRGIQQLYGGES------------------------------------------------------------------------------------- |
2 | 4dd8A | 0.13 | 0.09 | 3.03 | 0.64 | FFAS-3D | | ---RETRYVELYVVVDNAEGSEAAVRHRVLEVVNHVDK-LYQKLNFRVVLVGLEI-----WNSQDRFHVSPDARRHLHDNVITGVDFTGTTVGFARVSAMCSHSSGAVNQ-------DHSKNPVGVACTMAHEMGH-NLGMDHDENVQG-----------------------------------------CRCQERFEAGRCIMAGSIGSSFPRMFSDSQAYLESFLER----------PQSVC--------LANAPD------- |
3 | 3p1vA | 0.17 | 0.13 | 4.37 | 0.45 | HHpred | | -RYLQDCIDVAILAEGYTEKE-DVF----YQDAQRTCESLFSYERSKSKFNIVAVASPSTWKQTAVFDTFYSDRYLTSRVKVH---NALAGIPYTDVYGGGGIYNSYTLTTA----HH------PFKPVVVHEFGHSFGGLADEYFYDNDTYPLDVEPWEQNISTRVFASKWK------------D--LPSGAPIPTPIAEKKKYPVEGYSAKGIYRPAYDCR-K----TNE---Y-PEFCPVCQ-----RAIRR-IEFY----- |
4 | 1xfuA1 | 0.12 | 0.10 | 3.45 | 0.69 | MUSTER | | --------NNL-VKTEFT-NETLDKIQQTQDLLKKIPKDVLEIYSEL----GGEIYFTDIDVEHKELQDLSEEEKNSMN---SRGEKVPFASRFVFEKKR-ETPKLIINI-------KDYAINSEQSKEVYYEIGKGILDIISKDKSLDPEFLNLIKSLS----DDSDSSDLLFSQKFKEKLELNNKSIDIN--FIKENLTEFQH----SLASYYFAPDHRTVLE--------LYAP-----------MFEYMNKLEKFEKISES |
5 | 4q1lA | 0.11 | 0.05 | 1.78 | 0.67 | CNFpred | | ------RYIELVVVADHGMFNLNTIRKWVHEMLNTVNGFFRSM---NVDASLVNLEVWS-KKDLIKVEKDSSKTL-SHDHAQLLTVIVFDTIGIAYTAGMCDLSQSVAVVMDHS------KKNLRVAVTMAHELGHNLG------------------------------------------------------------------------------------------------------------------------------ |
6 | 3e1dZ | 0.12 | 0.08 | 2.92 | 0.35 | HHsearch-2 | | ------------------MLAD-------KESLIEALKLALSTNVKRNFTQSVEIILTFGID-K----KG-DLKL---REIVPLPKQPSKAKRVLVQLEYAKKASPKVVITREEL-----QKL-QGQKRPVKKLAQNEWFLINQE-SAGRLGPR--G-KFPTPLTADISEYI-----------------------------------NRFKRSVLVKTKDQPQVQVFI--GT-ED--KPEDLAENAIAVLNAIENKKTNLRGKAV |
7 | 1xfuA1 | 0.10 | 0.09 | 3.19 | 0.93 | Neff-PPAS | | -----------LVKTEFT-NETLDKIQQTQDLLKKIPKDVLEIYSEL---GGEIYFTDIDLVEHKELQDLSEEEKNSMN---SRGEKVPFASRFVFEKKR-ETPKLIINI-------KDYAINSEQSKEVYYEIGKGILDIISKDKSLDPEFLNLIKSLSDDSDSSD----------LLFSQKFKEKLELNNKSIDIN-----FIKENLTEFQHAFSLAFSYYFAPDHRTVLELYAPDMFEYMNKEKGGFEKISESLKKEGVEKD |
8 | 1eb6A | 0.10 | 0.06 | 2.22 | 0.54 | HHsearch | | -------------TEVTDCKGDSSLTSNAAKLANQAAEAAESGSKFEEYFKTTDQ---QTRTTVARLRAVAKGSTSGGSTTYHCNDPEPNVLAYTLPS------KNEIANCDIYYSEPPLAHAQDQATTTLHEFTHAPGGTED-LGYG-----Y-------DAATQ-LSAQDA---------------LN------------------NAD----------SYALYANA-------------------IEL---KC--------- |
9 | 4dd8A | 0.12 | 0.08 | 2.69 | 0.71 | SP3 | | ---RETRYVELYVVVDNAEGSEAAVRHRVLEVVNHVDKLYQKLN---FRVVLVGLEI---WNSQDRFHVSPDARRHLHDQLITGVDFTGTTVGFARVSAMCSHSSGAVNQ-------DHSKNPVGVACTMAHEMGHNLDHDENVQGCRCQERFEAGRCIM----AGSIGSSFPRMDCSQAERPQSVCLANAPD------------------------------------------------------------------------ |
10 | 3txaA1 | 0.07 | 0.06 | 2.71 | 1.00 | PROSPECTOR2 | | TTVELNQPLDVVVLLNNERANNSQRALKAGEAVEKLIDKITSNKDNRVALTEATVSKGVADQNGKALNDSVSWDYHKTTFTATTHNYSRIPKEAEHINGDRSSNARKKLITMSYAINFNPYISTSYQNQFNSFLN----KIPDRSGILQEDFIINGDDYQIVKGDGESFKLFSDRKVPVTGGTTQAAYRVPQNGYAINSGYIFDPKTKKVSATKQIKTHGEPTTLYFNGVNGDPGATPLEAEKFDTNKIYDELN--KYFKTVEEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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