Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ETAIFADKADIQEELTRLSSHFDLFSDTLKQEEPTGRRLDFLLQEMNREINTIGSKANDAAITERVVDCKSELEKMREQVQNIE |
1 | 5cwcA2 | 0.20 | 0.19 | 6.11 | 0.91 | SPARKS-K | | ECVENAQREDISEACRAAAEAFKRVAEAAKRGITSSETLKRAIEEIRKRVEEAQREGND--ISEACRQAAEEFRKKAEELKRR- |
2 | 1lvfA | 0.19 | 0.19 | 6.14 | 0.76 | FFAS-3D | | EDPFFVVKGEVQKAVNTAQGLFQRWTELLQPSAATREEIDWTTNELRNNLRSIEWDLEDLDETISIVERKAFITSTRQIVRDMK |
3 | 1lvfA | 0.16 | 0.15 | 5.15 | 0.27 | HHpred | | EDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPAATREEIDWTTNELRNNLRSIEWKFDATELSIFITSTRQIVRDMKDQMSA-- |
4 | 1l8dA | 0.14 | 0.13 | 4.50 | 0.97 | MUSTER | | KTTIEEERNEITQRIGELKNKIGDLKTAIEELKKAKEHREELLSKYHLDLNNSKNTL--AKLIDRKSELERELRRIDMEIKRL- |
5 | 4k1pA | 0.13 | 0.12 | 4.14 | 0.49 | CNFpred | | --AEATQITFVEDQVSSFTELIDRQITTLETL---LTDWKVLNNNMIQIQKNVEEGT-SSLLQKHFNQIKKVSDEMNKQTNQFE |
6 | 1vt4I3 | 0.12 | 0.12 | 4.21 | 0.48 | HHsearch-2 | | EYYFYIHHLKNIEHPERMTLFRMVFRFLERHDSTAWNASGSILNTLQQLKFYKPICDNDPKYERLVNAILDFLPIFEEAHKQVQ |
7 | 5t5sA1 | 0.07 | 0.06 | 2.49 | 0.82 | Neff-PPAS | | ---------KALRKAESLKKCLSVMEAKVKAQTAPNKDVQREIADLGEALATAIPQWQKDELRETLKSLKKVMDDLDRASKAD- |
8 | 1lvfA | 0.14 | 0.14 | 4.85 | 0.42 | HHsearch | | EDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPAATREEIDWTTNELRNNLRSIEWDLEATELSIFITSTRQIVRDMKDQMSAS- |
9 | 1lq7A | 0.15 | 0.12 | 4.01 | 0.99 | SP3 | | -----------GSRVKALEEKVKALEEKVKALGGGGR-----IEELKKKWEELKKKIEELGGGGEVKKVEEEVKKLEEEIKKL- |
10 | 1l8dA | 0.11 | 0.11 | 3.86 | 0.56 | PROSPECTOR2 | | KKTIEEERNEITQRIGELKNKIGDLKTAIEELKKAKEHREELLSKYHLDLNNSKNTLA--KLIDRKSELERELRRIDMEIKRL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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