Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | SLANINLKEVSFERNGNDLLLKTNNRTAVTFKGWFNKPNSSAGLNEYQRKLLEYAPEKDRARLKRQFELQRGKVDKSLNNKVEEIIGKDGERITSQDIDNLLDKSGNKKTISPQELAGLIKNKGKSSSLMSSSRSSSMLTQKSGLSNDISRMISATSGFGSSGKALSASPLQTNNNFNSYANSLATTA |
1 | 3ekiA1 | 0.11 | 0.09 | 3.28 | 0.72 | SPARKS-K | | ---------------------QGQWDKSITFGVWLNKKKGGEK----VNKEVINTFLENFKKEFNKLKNANDKTKNFDDVDFKVTPIQD-----FTVLLNNLSTDNPELINASGKLVEFLKNN-PGIITPALETTDVGVFRKSVNQLEQNLIVQTFINLAKNKQDTYGPLLGYNKKIDNFQKEIVEVY |
2 | 2rasB2 | 0.08 | 0.05 | 2.13 | 0.63 | FFAS-3D | | --------------------------EAIA-DYWFHPVEIEDVYEFFARRFVVRRKWEADPVKLQTYIEVGNDYFEQVRSYIDLA---------DHYLGEIIGEASDGSGLEVDETISLVNQCAPYCALNTTTFERLSEDK---LARIVDAVFDGLSAQDRGARSLTGL------------------- |
3 | 5cxlA | 0.24 | 0.08 | 2.49 | 0.53 | HHpred | | --INAGADQLWFARQGNDLEIRIGTDDALTVHDWYRDAD----------------------------------------HRVEII-HAANQAVDQAGIEKLVEAMA---------------------------------------------------------------------------------- |
4 | 2z6bA | 0.11 | 0.11 | 4.01 | 0.75 | MUSTER | | DNPNMSMAEMLRRDEGLRLKVYWDTEGYPTIIGHLIMKQPVRDMAQINKVLSKQSITMEEATTLFERDLADMQRDIKSHSKVGPVWQA-VNRSRQMALENMAFQMGVGGVAKFNTMLTAMLAGDWEKAYKAGRDSLWYQQTKGRASRVTMIILTGNLESYGVEVKTPARSLLAMAATVAKSSDPADPP |
5 | 1ncxA | 0.13 | 0.07 | 2.39 | 0.53 | CNFpred | | -------------------------------------------MTDQQAEARAFLSEEMIAEFKAAFDMFDGDIS---TKELGTVMRMLGQNPTKEELDAIIEEVDGSGTIDFEEFLVMMVRQ-------------MKEDAKGKSEEELANCFRIFD------------------------------- |
6 | 5cxlA | 0.22 | 0.07 | 2.35 | 0.93 | HHsearch-2 | | RIN-AGADQLWFARQGNDLEIRIGTDDALTVHDWYRDAD----------------------------------------HRVEII-HAANQAVDQAGIEKLVEAMA---------------------------------------------------------------------------------- |
7 | 5nnvA | 0.07 | 0.07 | 3.01 | 0.84 | Neff-PPAS | | SAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRR |
8 | 5cxlA | 0.23 | 0.08 | 2.49 | 0.94 | HHsearch | | RI-NAGADQLWFARQGNDLEIRIGTDDALTVHDWYRDAD----------------------------------------HRVEII-HAANQAVDQAGIEKLVEAMA---------------------------------------------------------------------------------- |
9 | 1hqvA | 0.09 | 0.08 | 3.02 | 0.51 | SP3 | | PAALPDQSFLVFQR------VDKDRSGVISLQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN-FSEFTGVWKYITDWQNVFRTYDRDNSMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGR---GQIAFDDFIQGCIVLQRLTDIFRRY---DTDQDGWIQVS----------YEQYLSMV |
10 | 5hamA | 0.06 | 0.05 | 2.34 | 0.62 | PROSPECTOR2 | | DYW-YTENEI------THLLTAQLDEKKFSVQPAITFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALM-----------LGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNDGQKLPKLIDKTLGNLPNKPIIIDEQTKLTDAMFKQDAQWIRQQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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