Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | FEGYYASVVYAYLASLGYEIIPEDTTNKGRIDLTVKTRPYIWIFEFKVKGIDHSGNKDPLKQIKERGYAEKYAADSRPVIEIGIVFDPKTRNIEAW |
1 | 3fovA | 0.16 | 0.16 | 5.17 | 1.06 | SPARKS-K | | ---SAEASAADYLERQGYRILARFKTRCGEIDLVAQRDALVAFVEVKARAYA--VTPRQQSRIVAAAWLSRHPEHASELRFDAILIATAPRHLPGA |
2 | 5gkeA2 | 0.14 | 0.14 | 4.60 | 1.16 | MUSTER | | SEAEMAELIFENPEVIGFPLFREKAIGTGIVAVLGRDSDNIVVLELK----RRRAELHAVRQLKSY-ILREEYGDKVRGILVAPSLTSEKEGLEFR |
3 | 5gkeA2 | 0.16 | 0.15 | 4.88 | 1.02 | HHsearch-2 | | SEAEMAELIFENPEVIGFKLFREKAIGTGIVAVLGRDSGNIVVLELKRRRA----ELHAVRQLK--SYVEILREEGDKVRGILVALTSGGLEFRKL |
4 | 1y88A1 | 0.15 | 0.15 | 4.93 | 1.11 | Neff-PPAS | | -LYFQGHMVARLLEEHGFETKTNVICVEQEIDVVAERDGERYMIECKFHNIPVYTGLKEAMYTYARFLDVEKHGFTQPWIFTNTKFSEEGIKLTGW |
5 | 5gkeA2 | 0.16 | 0.15 | 4.86 | 1.18 | HHsearch | | SEAEMAELIFENPEVIGFKLFREKAIGTGIVAVLGRDSGNIVVLELKRRRA----ELHAVRQLK--SYVEILREEGDKVRGILVALTSGAKRFRK- |
6 | 1ob8B | 0.12 | 0.11 | 4.02 | 1.01 | SPARKS-K | | IGKNAERELVSILRGEGFNAVRIP--TNPLPDIFATKGNTLLSIECKSTWENKVKVKE--HQVRKLLFLS---MFTMGVPLIAIKFKQVHEWRVLV |
7 | 2vldA2 | 0.15 | 0.15 | 4.89 | 1.13 | MUSTER | | -SEAEANLIFENPRVIGFKPIREKPIRHGIVDVGVDKDGNIVVLELKRRKAD----LHAVSQKRYVDSLKEEYGENVRGILVAPSLTEGAKKLEKE |
8 | 5gkeA2 | 0.16 | 0.15 | 4.86 | 1.08 | Neff-PPAS | | -EAEMAELIFENPEVIEKPLFREKAIGTGIVAVLGRDSGNIVVLELK----RRRAELHAVRQLKS--YVEILREEYDKVRGILVAPSLEKEGLEFR |
9 | 5gkeA | 0.16 | 0.15 | 4.86 | 1.18 | HHsearch | | SEAEMAELIFENPEVIGFKLFREKAIGTGIVAVLGRDDGNIVVLELKRRRA----ELHAVRQLK--SYVEILREEGDKVRGILVAPSLTSFRKLE- |
10 | 3s1sA1 | 0.16 | 0.16 | 5.19 | 1.01 | SPARKS-K | | YHPICEAALNQALVNTGYEVVHHELVGSIEADFVIKNKKYLLIVEVK---RTKSQVSSTRYRLQAQSYVREANIKEQHYYCLTDFFKHDPQIIEPS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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