Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MSDELKKLKSQVEDLQELVKKQNLLISKTGQSVLELQVAKQRADVEDLDSKFVAAKSGKSHIDTTDLATNDDLVQLVGELQGQLDSIEERSIRRLVNSTKTEKKEYLAPLPNADGEIPTVSDGFFPRSLEDFETLSNVNLFKLAKFYELLPPSLKEQEKFEDFLEGKVENFHINDATDEEIEAELKNYSEDQLTDIFNDVARYLGVRTRKGTDIW |
1 | 4uosA | 0.14 | 0.12 | 3.94 | 0.91 | SPARKS-K | | --GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEN-------------GEDSEKILMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVD-----------------------NEEVKKMLEKMIEEIKKMLEKAIKVKEMLEKMIKEIKKMLEN----GEDSEKILKKAKEMALKMVIELAEKILKKAKEMAEKILKKV |
2 | 6ewyA | 0.11 | 0.09 | 3.20 | 0.96 | FFAS-3D | | QTDTIAALIADVAKANQRLQDLSDEVQAEQESVAMVDVETARDNAAAAEDD------------------LEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVSY--LSASS-------PDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTE-TRRKFDEQREEVQRL------------ |
3 | 5td8D | 0.11 | 0.05 | 1.83 | 0.30 | HHpred | | SIDAFSDLERRMDGFQKDVAQVLARQQNHA-RQQLQQFQAEMRQVALYELRVLDVHGDHVIGNSHPALDPKSRATLEHVLTVQGDLAFLVVARDMLL---------------------------------------------------------------------------------------------------------------------- |
4 | 4uosA | 0.16 | 0.14 | 4.64 | 0.92 | MUSTER | | --GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEN--------GEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDN-----EEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEK--ILKMVIELAEKILKK--AKEMAEKILKKVKELGVG-------- |
5 | 3o1hA | 0.13 | 0.09 | 3.25 | 0.61 | CNFpred | | DSKLLDALESNVQNVINNLAELGVTVERKLAKEIDTRVEEMRLL-------------------------SEELEQLTRTQVQNTSTIAVANVTHIYDLLKDQVYQALDALV-----------EVDLDLTERLHELLAFKMLNQIEEARTLT-NVDRIQQIQTAFEN----------NLKIMKRRVLAVEDPTRSKQMSQLLTELG---------- |
6 | 2pffB | 0.17 | 0.15 | 5.05 | 0.57 | HHsearch-2 | | CYNDIHALAAKLLQE------NDTTLVKTKELI-KNYI---TARIMAFDKKSNSALEGNAQLNTDDYFEERDLYQTYHVLVGDLIKFTLSELIRTTLDAEKQGLNILEWLENPSNT-PDKD--YLLSIPISCPLIQLAHYVVGVRCYEAYPNTSLPPSILEDSLENNEGVPS--------PMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV |
7 | 5nnvA | 0.08 | 0.08 | 3.25 | 1.16 | Neff-PPAS | | ESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDL-SFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIAL-RRDQRIKLQHGLDTYERELYKQKTTLL |
8 | 4ll7A | 0.15 | 0.06 | 2.03 | 0.32 | HHsearch | | -SRVIESLHDQIDMLTKTNLQLTTQSQNLLSKLAQSKESKLLENLNLLKN------------------ENENLNSKLKELEKDYSELSNRY-NEQKEKMDQLSK-----L--------------------------------------------------------------------------------------------------------- |
9 | 4uosA | 0.13 | 0.11 | 3.84 | 0.65 | SP3 | | --GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEM--------AEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDN-----------------------EEVKKMLEKMIEEIKKMLEKA---IKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEM-AEKILKMVIELAEKILKKAKEMAEKI |
10 | 4uosA | 0.15 | 0.13 | 4.22 | 0.80 | PROSPECTOR2 | | G--DNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEM--------AEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDN-----------------------EEVKKMLEKMIEEIKKMLE---KAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILILKKVKELGVG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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