Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LLASHVAMNRVLPLVVDGDSSNIGLGYVAHGFARHAPSAYLAYALLLSVGAGHMVWGMARWLDFAPPANWKKITFDKPTRSRRRRAWWAVNAAAASLAALWAAGGLGVVARAG |
1 | 2bs2C | 0.14 | 0.12 | 4.25 | 1.09 | SPARKS-K | | LGSVHLYIMMTQPQTI-------GPVSSSFRMVSE--WMWPLYLVLLFAVELHGSVGLYRLAVKWGWFD--GETPDKTRANLKKLKTLMSAFLIVLGLLTFGAYVKKGLEQTD |
2 | 5xmjC | 0.14 | 0.11 | 3.63 | 1.52 | HHsearch-2 | | LGAVHMFVVLTDLP-ITA-------AKSAARLQ-SG--WLYLYLVLLPLAELHVGVGFYRIGVKYGFV-------GRNKRKWQKTENLMMIGFITIGLTLV---RFM------ |
3 | 5xmjC | 0.14 | 0.11 | 3.63 | 1.56 | HHsearch | | LGAVHMFVVLTDLP-ITA-------AKSAARLQ-SG--WLYLYLVLLPLAELHVGVGFYRIGVKYGFV-------GRNKRKWFQKTENLMIGFITIGLTLVR--FM------- |
4 | 1nekD | 0.16 | 0.13 | 4.43 | 0.97 | SPARKS-K | | NGVHDFILVRATAIVLTLYIIYMVGFFVWIGFFAS-AFTKVFTLLALFSILIHAWIGMWQVLTDYVK------------PLALRLMLQLVIVVALVVYVIYGFVVVWGV---- |
5 | 2bs2C | 0.15 | 0.13 | 4.44 | 0.71 | FFAS-3D | | LGSVHLYIMMT-------QPQTIGPVSSSFRMVSEWMW--PLYLVLLFAVELHGSVGLYRLA------VKWGWFDGETPDKTRANLKKLKTLMSAFLIVLGLLTFGAYVKKG- |
6 | 2bs2C | 0.14 | 0.12 | 4.22 | 0.53 | HHpred | | LGSVHLYIMMTQPQTIGPVSS---SFR----MVSEW--MWPLYLVLLFAVELHGSVGLYRLAVKWGWFDGET---PDKTRANKKLKTLMSAFLIVLGLTFGAYVKKEQTDP-- |
7 | 2bs2C | 0.17 | 0.15 | 4.96 | 0.89 | MUSTER | | LGSVHLYIMMTQPQTI-------GPVSSSFRMVSEW--MWPLYLVLLFAVELHGSVGLYRLA---VKWGWFDGETPDKTRANLKKLKTLMSAFLIVLGLLTFGAYVGLEQTDP |
8 | 5oqtA | 0.08 | 0.07 | 2.80 | 0.87 | CNFpred | | LGIGAIIGTGIFVLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATF-------------GELIAWILGWDLILEYGVASSAVAVGWSGYFQGL |
9 | 2bs2C | 0.16 | 0.14 | 4.72 | 1.31 | HHsearch-2 | | LGSVHLYIMMTQPQTIGPVSS---SFR----MVSEW--MWPLYLVLLFAVELHGSVGLYRLAVKWGWFDGET---PDKTRANKKLKTLMSAFLIVLGLTFGAYKGLEQTDPID |
10 | 1nekD | 0.15 | 0.12 | 3.88 | 0.84 | Neff-PPAS | | YIIYMVGFFATS--------GELTYEVWIGFFAS--AFTKVFTLLALFSILIHAWIGMWQVLTDYV------------KPLALRLMLQLVIVVALVVYVIYGFVVVWGV---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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