Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MTLEYIKKLMGWCPNAKAFETRRSVCPEYLEADNQSRGKDAGNSPVPSPGWWNKRHNRSLIDSSVFTLFSIYLIGFQGVSPVDERFMSGVILGIIFNLSLCIRTWSYLDDIKNSSRQRKIITVSSKEKIIKLINIIIALVILYLLFSQFNWGFVLFLISAFCLIALLYYFKFDFSPMVFLFYLGSPNTVFSSGIAGICLTAFLYYLTDVYWEKRNGKIVLVYDRKMSEICIVNA |
1 | 4tkrA | 0.09 | 0.07 | 2.59 | 0.78 | SPARKS-K | | -------------------NKRLIILLECAIFAAVAMVLSFIPLDIGSSFSISLGMIPMYVIAIRRGLLWGLLHFLTGKAYILMP--SQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAYAFQ--------------------------GWGAQLFSIVMNGASCLGTVLVSGIIISILLKTSPKLFLP------------ |
2 | 6a2jA | 0.12 | 0.10 | 3.65 | 0.89 | FFAS-3D | | --VMLIVLIGG--ALVTKTGSGQGCGRQ-------WPLCHGRFFPELNPASIIEWSHRFASGISIILVLSLAFWSWRKITPIFIFLFLQALLGGISLISFASVLILTLLIFEADKSVRTLVKPLQIGKKMQFHMIGILIYSYIVVYTGMGHRAAALLLFVWIIVACLIFITLQALSGIMIVYSELAFALAHSFFIACLFGVLCYFLLLIARFRYES------------------ |
3 | 5yd1A2 | 0.15 | 0.05 | 1.58 | 0.28 | HHpred | | ------------------------------NVYNQE--YESA------AAFWPDVHGRVITALIISQLLLMGLLGTKHAA------SAAPF--LIALPVITIGFHRFCKGRFEPAFVR-------------------------------------------------------------------------------------------------------------------- |
4 | 6ftg51 | 0.10 | 0.09 | 3.32 | 0.72 | MUSTER | | FSHRIYVAYCTVISFVQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLIIASTTWSSYYFDLQLLVFMFPVGLYYCFS----------NLS-----------DARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVL---STYMKNLDIEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIF- |
5 | 3rkoB | 0.09 | 0.05 | 1.97 | 1.07 | CNFpred | | -----------------------------------------------------MWATLMLLGGAVGKSAQTWLADAMAG---PTPVSALIHAATMVTAGVYLIARTHGLFLM-------------TPEVLHLVGIVGAVTLLLAGFAALV-QTDIKRVLAYSTMSQIGYMFL-------ALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC-------------------- |
6 | 6adqD | 0.09 | 0.03 | 1.32 | 0.46 | HHsearch-2 | | ------------------MSSTQDRSQLDPEVERHT-GVDVEDVPSAEWGWS-HMPIGVMHIGGLLSAAFLLVM-MRGNH--VGHVEDWFLIGFAAVIVAL-VGRN-WWLRRRGWIR--------------------------------------------------------------------------------------------------------------------- |
7 | 5y50A2 | 0.09 | 0.08 | 2.94 | 0.94 | Neff-PPAS | | WSFEFLVLLSGIL--------------------------PNPKLEASVLSVCLSTQSSLYQIPESLGAAASTRVANELGAGNPKQARMAVYTAMVITGVESIMVGAIVFGARNVFGYLFSSETEVVDYVKSMAPLLSLSVIFDALHAALSGVARGSGRQDIGAYVNLAAYYLFGIPTAILLAFGFKMRGRGLWIGITVGSCVQAVLLGLIVILTNWKKQARKARERVM------ |
8 | 6adqD | 0.08 | 0.03 | 1.20 | 0.38 | HHsearch | | ------MSSTQDRSQLDPEVRHTGVDV----EDVPSA----------EWGWS-HMPIGVMHIGGLLSAAFLLVM-MRGNHV--GHVEDWFLIGFAAVIVAL-VGRNW-WLRRRGWIR--------------------------------------------------------------------------------------------------------------------- |
9 | 3vvnA2 | 0.08 | 0.07 | 2.73 | 0.65 | SP3 | | -SREILKDILR---VGLPSSLSQLSMSIAMFFLNSVAITAGGENGV---AVFTSAWRITMLGIVPILGMAAATTSVTGVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDL--ISALRTLPVFLVLTPFGMMTSAMFQGIEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRVWIGIVIGNMVAAIVGFLWGRMRISALKKT------------------ |
10 | 5cwmA | 0.10 | 0.09 | 3.19 | 0.82 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVA---------LRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIAEARELQERVKELRER------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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