Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LLDEIRPIDVGLDNEAQIARNWNNSTRQPNGRRGRNGANQFTSPIKYLHIHESESFSMGIFCMPPSSVIPLHNHPGMTVLSKLLYGTLHAESYDWIDVTDPTDQLQELSVRPARLVRDREMSAPETTILYPNRGGNIHTFRAITPCALFDVLSPPYSAEKGRDCSYFRKSSVREPPPVVLPGEINSAEVIWLEELEDHQPPEGFVVARGLYKGPS |
1 | 3ussA | 0.15 | 0.12 | 3.93 | 1.90 | SPARKS-K | | FIGELASTLLAAHPLLAELVHQDDWLPEDCARPDPQRY-------QQYLLHVDQRFSVVSFVWGPGQITPVHDH-RVWGLIGMLRGAEYSQPYAFDAGGRPHPSGAR-----------RRLEPGEVEALSPRIGD-VHQVSNARTSISIHVYGANI---GAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKE--------------------- |
2 | 2atfA | 0.18 | 0.10 | 3.32 | 1.16 | FFAS-3D | | -------------------------------------AKFDQYRYTRNLVDQGNGKFNLILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEI-----------KKSERTLRENQCAYI--NDSIGLHRVENVEPAVSLHLYSPPFDQRTGHKTTFHSKF--------------------------------------------- |
3 | 3ussA | 0.18 | 0.12 | 3.79 | 1.65 | HHpred | | ------LAELVHQDDWLPE-D---------------CARPDPQRYQQYLLHVDQRFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGR-----------PHPSGARRRLEPGEVEALSPRI-GDVHQVSNARTSISIHVYGANIGA---VRRAVFSA-EGEEKPFIS------------------------------------ |
4 | 3ussA | 0.18 | 0.14 | 4.70 | 1.69 | MUSTER | | LLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRY----QQYLLHVDQRFSVVSFVWGPGQITPVHDH-RVWGLIGMLRGAEYSQPYAFDAGGR-----------PHPSGARRRLEPGEVEALSPRIG-DVHQVSNARTSISIHVYGANIGA---VRRAVFS--AEGEEKPFISGYSNSRLPNIW----DLSKE--------------- |
5 | 4yniA | 0.19 | 0.10 | 3.14 | 1.89 | CNFpred | | ---------------------------------------------TRNLVDQGGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKK----------SNEMIKKSERTLRENQCAYINDS--IGLHRVENVSPAVSLHLYSPPFD-----TCHAFDQR--------------------------------------------- |
6 | 3ussA | 0.20 | 0.14 | 4.62 | 1.92 | HHsearch-2 | | LLAELVHQDDWLPED---------------------CARPDPQRYQQYLLHVDQRFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGR-----------PHPSGARRRLEPGEVEALSPRI-GDVHQVSNARTSISIHVYGANIGA---VRRAVFSA-EGEEKPFI---SG-------YSNSR----LP-NIWDLSKE----- |
7 | 3ussA | 0.16 | 0.13 | 4.20 | 2.68 | Neff-PPAS | | LLDSRPDESTLLAQAHPLLAELVHQDDWLP----EDCARPDPQRYQQYLLHVDQRFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGR------------PHPSGARRRLEPGEVEALSPRIGDVHQVSNARTSISIHVYGANIGAVR---RAVFSAEGEEKPFISGYSNSRLPN-------IWDLSKE-------------- |
8 | 3ussA | 0.17 | 0.13 | 4.14 | 2.50 | HHsearch | | FIGELLLAELVHQDDWL---------------PED-CARPDPQRYQQYLLHVDQRFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGR-----------PHPSGARRRLEPGEVEALSPRI-GDVHQVSNARTSISIHVYGANIGA---VRRAVFSA-EGEEKP---FISG-------YSNSR----LPNIWDLSK-E----- |
9 | 3ussA | 0.17 | 0.13 | 4.30 | 1.27 | PROSPECTOR2 | | SILRLDRGEL----ATLLDSRPDESTVHQDDWLPEDCARPDPQRYQQYLLHVDQRFSVVSFVWGPGQITPVHDH-RVWGLIGMLRGAEYSQPYAFDAGGR-----------PHPSGARRRLEPGEVEALSP-RIGDVHQVSNARTSISIHVYGANIGA---VRRAVFKPFISGYSNSRLPNIWDLSKE--------------------------- |
10 | 3ussA | 0.20 | 0.12 | 3.87 | 1.33 | SAM | | -LAELVHQDDWLPEDCA---------------------RPDPQRYQQYLLHVDQRFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGG------------PHPSGARRRLEPGEVEALSPRI-GDVHQVSNARTSISIHVYGANIGA---VRRAVFS----------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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