Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KAEDQSKLQPQKNWSNLKKAIMLRRFVKALEKVRKFKPVDPQPLKSFNPAEPRFLPLNSDPEAEKVHLKHQSMEDRKLAEEWMLDYALQQVVSRLNPARKRKVALLVEAFETVMP |
1 | 5xwpA1 | 0.21 | 0.17 | 5.54 | 0.83 | SPARKS-K | | REYSETDVRDKKNFAVLKKIYFRNDIKKKLNKINSLKYSFEKNKANYQKINEN--------NIEKVEGKS--------KRNIIYDYNVKEAFDKLYK--EEDIAKLVLEIENLTK |
2 | 5yoxA1 | 0.14 | 0.11 | 3.89 | 0.66 | FFAS-3D | | -------------WREILAILSKNYQLAFLNIIQLLKTQRSISDHYRG---LTTLITDKNVDRNKCILVHDFAEEKHRREFETVKYLCESIIRPCSESASREILDDWLAYEK--- |
3 | 4qmhA2 | 0.18 | 0.14 | 4.52 | 0.27 | HHpred | | ----------GGSPAL-K-----TELWAWLADLPG-----------LPPKSVSKEDIHSMVPHLYAHICDRNADVRKNANEAVLGDAMNRALDKQKPASKKDILAALEKARPNLP |
4 | 5fj8O | 0.12 | 0.11 | 3.96 | 0.74 | MUSTER | | YEKHYKNIPRNSPLSDLKKRSQAKMNAKTDFAKIINKPNELSQILTVDPKT-SLRIVKPT-----VSLT-----NLDRFMKGRRSKQLINLAKTRVSVTAQVYKIALRLTEQKSP |
5 | 5v6rA | 0.14 | 0.09 | 2.95 | 0.47 | CNFpred | | ----------------YYTSIMKELLVDLIDASAAK--------------------------NPKLMLRRTE----SVVEKMLTNWMSICMYGCLRETVGEPFFLLLCAIKQQIN |
6 | 6j67A | 0.10 | 0.09 | 3.20 | 0.43 | HHsearch-2 | | RGSRLLVRPLGKEHTV-SRLLRVMQCLSRIEEGENLDCS-------FDMEA-ELTPL----ESAINVLETETLTE-AVVESS-RKLVKEAAVIIC--IKNKEFEKASKILKKHMS |
7 | 6bljA1 | 0.10 | 0.10 | 3.53 | 0.92 | Neff-PPAS | | KVIELDEVWRATIGKLNHIKSFTGIISKEVGNRMKNKVPLGDDLELPKEVTDDVYALFTKEALEQGSLAKLNTNQLKKLSTYITEVHIKNSEEEVKQKEKERDDVLLQI------ |
8 | 6gygB | 0.17 | 0.09 | 2.87 | 0.44 | HHsearch | | ------------------------------------------FRK--------NIKLTEPIFNKLKAL--MKVKDVK-QYE-LIEIILDFYVTKLSEKEREFFNYQLEELRKEE- |
9 | 5hkqI | 0.16 | 0.14 | 4.60 | 0.66 | SP3 | | LPYERSEPGWT--IRSYFDLYNENRFLDAVENIVNKPDNSYDESEHFE--GVEFAVGYPPDEDDIVIVSEETCFERLACEKYLQLH----------PEDTEKVNKLLSK----IP |
10 | 6bljA1 | 0.11 | 0.10 | 3.77 | 0.49 | PROSPECTOR2 | | DVTLVDKIELDEVWRATIGKLFTGIISKEVGNRMKNKVPLGDDLELPKEVTDDVYALFTKEALEQGSLAKLNTNQLKKLSTYITEVHIKNSEEEVKQKEKERDDVL------LQI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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