>PF07773 (314 residues) CVCDLSPAQCDVNCCCDLDCSSTDFSVFSACSVPVVTGDSQFCSQKAAIYSLNFTANPPQ RVFKLVDQVNPSIFCIHVLNYKPALSFVNPEVPDENTFDRFMKTSGGFTLNAESDASSTT NSGASGAAKYKYGVPVQTSSASSNSFLRLPSPLASSLCSDNNPAAFLVNQAVKCTRRMHL EQCEEIEALSMAYYSSPTILRVPNSATQVPITVQSITIQSLNKTLTRLESTGVLQPALIG AGEDKTCTNVVLQVKYSLTYTDRGKILEAGVSFLLGTVRSTVAALQQKFEIRFIQQNTKP VPLSGNPGYVVGLP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | CVCDLSPAQCDVNCCCDLDCSSTDFSVFSACSVPVVTGDSQFCSQKAAIYSLNFTANPPQRVFKLVDQVNPSIFCIHVLNYKPALSFVNPEVPDENTFDRFMKTSGGFTLNAESDASSTTNSGASGAAKYKYGVPVQTSSASSNSFLRLPSPLASSLCSDNNPAAFLVNQAVKCTRRMHLEQCEEIEALSMAYYSSPTILRVPNSATQVPITVQSITIQSLNKTLTRLESTGVLQPALIGAGEDKTCTNVVLQVKYSLTYTDRGKILEAGVSFLLGTVRSTVAALQQKFEIRFIQQNTKPVPLSGNPGYVVGLP | |||||||||||||||||||
1 | 1bp1A | 0.06 | 0.02 | 0.69 | 1.03 | CNFpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFKIKH-LGKGHYSFYSMDIREFQLPSSQISMV----VGLKFS-----ISNANIKISGKWKAQKRFLKMSGNFDLSIEGM-----SISADLKLGSNP------------------- | |||||||||||||
2 | 3cnfT | 0.08 | 0.08 | 3.10 | 1.15 | Neff-PPAS | -----LLGPFQYFNFSETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYA--RSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDYIDIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLHTFHYRSESDMIDHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRLAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLY----------MTQRHQELLLAQITADPNILLYPYTYIFTTAYTSMNY | |||||||||||||
3 | 4uxeA | 0.10 | 0.10 | 3.55 | 1.07 | PROSPECTOR2 | SSSTGEFGGSLAANRTFTIRNTGAPTSIVFEKGPASGANPAQSSIRVWGNQFGGGSDTTRSTVFEVGDDTSHHFYSQRNKDGNIAFNINGTVPINI---------NASGLNVNGTATFGRSVTANGEFISKSANFFIRNDASNTYFLLTAAGDQTGGFNGLRPLLINNQSGQITIGEGLIIAKGVTINSGGLTVNSRIRSQGTKTSDLYTRAPTSDWSIDINDSATYNQFPGYFKVEKTNEVTGLPYLERGEEVGTLTQFGNTLDSLYQDWITYPTTPEARTTRWTRTWQSSFVQVFDGGNPSDNATGNLTIRD | |||||||||||||
4 | 4aq1A | 0.07 | 0.07 | 2.96 | 0.88 | SPARKS-K | ALNNSSLKVGEESGLTVKDQDGKDVVGAKVELTSSNTNIVVVSSGEVSVSAKVTAVKPGTADVTAKVVVLTNTFKVTVTEVPNQGFTLVDNLSNAPQNTVAFNKAEKMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANAGQSG-----KASFEVTFKDNTKRTFTVDVKKEPVLQDIKVDATSVKLSDEAVGGGEVNQKTIKVSAVDQYGKEIKFGTKTNTEGLVIKNVNSDNTIDFSATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTS-TKTITVNVVNVKADATPVGLDIVAPSEID | |||||||||||||
5 | 3ghnA | 0.16 | 0.14 | 4.67 | 0.55 | FFAS-3D | CSCDGTE--CGVECCCSRSCGGGVVTRRRQCNNPRPAFGGRACVGADLQAEMCNTQACEKTQLEFMSQQ-----CARTDGQPLSFYHWAVPHSQGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPREDGTLSLCVLGSCRTFGRMDSQQVWDRCQVCG------GDNSTCSPR-------KGSFTAGRAREYVTFLTVTPNLTSVYIANTHLAVRIGGRYVVAGKMSISPNTTYPSLLEDG-------RVEYRVALTEDRLPRLEEIRIW--------GPLQEDADIQVYRRYGEEYGNLTRPDYFQPKP | |||||||||||||
6 | 3oqqA | 0.10 | 0.04 | 1.53 | 0.29 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------RTLTLNVPAACE------KVY-KYNTVFETNRLASVT-----LALPEDAV-QP-----TNETDYLFYH---NT---------GV-V-FED-GWPIQLDSWYDEDFNDVVFEYDLKVTEETVGGKEELLLTLDVRAVGG---IYPTVLGVVLDGLKSEILILKGGQG------ | |||||||||||||
7 | 6nb3A1 | 0.14 | 0.13 | 4.38 | 0.87 | MUSTER | -TVDVGPDSVKSAC--EVDIQQTFFDKTWPRPIDVSKADGII-YSNITITYQGQGDHGDMYVYSAGHATGTTPQKLFVANYSQDVKFANIGAAANSTGTVIISPSTSATIRKIYPASSVGNFSDGKMGRFFNHTLVLLPDGCGTLLRAFLEPRSGNHCPAGNSYTSFA------TYHTPATDCSDGNYNRNASLNSFKEYFNLRN--CTFMYTYNITEDEILEWFGITQTAQGVHLFSSRYVDLYG-GNMFQFATLPV----YDTIKYYSIIPHSIRSIQSDRKAWAAFYVYKLQPLTFLLDFSVD-GYIRRAI | |||||||||||||
8 | 1ewfA | 0.07 | 0.02 | 0.67 | 1.01 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHYSFYSMDIREFQLPSSQISMVP---VGLKFS-----ISNANIKISGKWKAQKRFLKMSGNFDLSIEGM-----SISADLKLGSNP------------------- | |||||||||||||
9 | 2ao7A1 | 0.26 | 0.04 | 1.18 | 0.49 | HHsearch-2 | CCYKLKPGQCSQGPCCTAHCAFKSKT--EKCRDDGINGITALCPASDP---------------K---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6nb3A1 | 0.08 | 0.08 | 2.99 | 1.14 | Neff-PPAS | -PRPIDVSKADGIIYPQGRTYSNITITYQGLFPYQGDHGDMYVYSAGHATGTTPQKLFVANYSQDVKQFANGFVVRIGAAANSTGTVIISPSTSATIRKIYPAFMLGSSVGNFSDGKMGRFFNHTLVLLPDGCGTLLRAFYCILEPRSGNHCPAGNSYTSFATYHTPATSDGNYNRNASLNSFKEY-----FNLRNCTFMYTYNITEDEILEWFGITQTAQGVHLFSSRYVDLYGG----------------NMFQFATLPVYDTIKYYSIIPHSIRSIQSDRKAWAAFYVYKLQPLTFLLDFSVD-GYIRRAI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |