Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TLSRISFYRLRAYTYPFQNNDDPNHPFIVDVDFETIIKLYKFDRKLRLLVFDAIEKIEIALRTQIIYHFALTHGSHWQTDPNLFRDIARFAKHLETLNKEVERSDETFIKHYKEKYSSPSQPPSWMSLEVASMGTLSKFYQNLKKSPEKETISRSFGLPKFFILENWMFCFSSLRNICAHHGRLWN |
1 | 5k7vA | 0.06 | 0.06 | 2.54 | 0.80 | SPARKS-K | | AIAELAKKAIEAIYRLADNHT----------TDTFMARAIAAIANLAVTAILAIAALAEEFMARAISAIAELAKEAIYRLADNHTTDKFMAAAIEAIALLATLAILAIALLAS-NHTTEEFMAAISAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEARKAIKAIEMLAKNITTEEYKEKAKS |
2 | 3dadA2 | 0.10 | 0.09 | 3.41 | 0.88 | FFAS-3D | | -LRRS----LFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAADHNYQSYILRALGQLGVVAHSDTIQWLYTLCASLKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTL--INKTLAALPDQDSFYDVTDALEQQGMEALVQRHTQLVLYENALKLED---- |
3 | 3c8gB | 0.11 | 0.05 | 1.95 | 0.21 | HHpred | | --------------------------------------------------------------DDVLEQLDAQDNLFS------F---TAHSILLQGIRQFLPSVDDEEIVEYA-------V-PLL--AQSGPLDDI----------DVALRLIYALGK-D-KWLYADITHFSQYWHYLNEQDETPG |
4 | 6el1O | 0.07 | 0.07 | 2.85 | 0.77 | MUSTER | | SYPDINFKIFSQGVKNISHLAQFKTTGVEVL-QEKALRVSLYSQRLDVIVRESLSSLQVKLENTLALTYFTTLEEIDEALISQDIDEESKSEMRKERINIIKNL-SNDITQLKQLFIEKTELLDKSSSDLHNVVIIEGTDKVLQAQLRQKQLTEDI-ATKELERKEIEKKRDKIIEALD----VIR |
5 | 4gzuA | 0.11 | 0.10 | 3.67 | 0.65 | CNFpred | | -------KDLEVITVWFRSVL----IKEEAMPAALMALLFSNIDPVYEFHRGFLHEVEQRLHQRIGDILLRNMR-QLKEFTSYFQ---RHDEVLTELEKATKHCLEAVYKEFELQKVCYLPLNTFLLKPVQRLVHYRLLLSRLC-HRDYADCHEALKTEVTTELQQSLTRLENLQKLTELQRDLVG |
6 | 1vt4I3 | 0.13 | 0.10 | 3.35 | 1.08 | HHsearch-2 | | ------EYALRSIVDHYNITFD-SDDLIPPYLDQYFYS----------HIGHHLKNIEHPERMTLFRFLEQKIRHDSTAWNASGSILN----TLQQLK--------FYKPYICDND-----PKYRLVNAILDF--LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQ-------------VQR |
7 | 5cwqA | 0.06 | 0.06 | 2.58 | 0.78 | Neff-PPAS | | ---GDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVGDSEVKRLAEEAEQLAREARRHVQECRG |
8 | 3c8gB | 0.08 | 0.04 | 1.68 | 0.84 | HHsearch | | ----------------------------------------------------------TLTEDDVLEQLDAQDNLFSF-T-----AHSILLQG---IRQFLPSVDDEEIV----EYA---V-PLLA--QSGPLDDI----------DVALRLIYALGK-D-KWLYADITHFSQYWHYLNEQDETP- |
9 | 3nxcA2 | 0.08 | 0.05 | 2.13 | 0.71 | SP3 | | --------------------------------------IEFIEDSLITRINLILKDTTARLRLIVLLLLGFGERNPGL--TRILTGHARLQGRINQLFERIEAQLRQVLREKRMR-EGGYATDETLLASQI-LAFCEGMLSRFVRSEFKYRPTDDF----DARWPLIAAQLQ-------------- |
10 | 3vibA | 0.08 | 0.06 | 2.56 | 0.67 | PROSPECTOR2 | | TFYRKGI---------------------ARTSLNEIAQDALFQRICDDIWTVFRHTLLHFFERLQSNDIHYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKETAVIFI-KSTLDGLI--------WRWFSSGESFDLGKTAP---RIIGIMMDNLENHPCLRR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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